Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
RAB11AP62491 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB11AP62491 KRT8P47-201ENST00000604727 1398 ntBASIC14.04□□□□□ -0.16
RAB11AP62491 LINC01311-201ENST00000565162 1445 ntBASIC14.04□□□□□ -0.16
RAB11AP62491 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB11AP62491 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB11AP62491 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB11AP62491 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB11AP62491 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB11AP62491 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB11AP62491 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB11AP62491 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB11AP62491 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB11AP62491 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
RAB11AP62491 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.03□□□□□ -0.16
RAB11AP62491 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB11AP62491 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RAB11AP62491 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
RAB11AP62491 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB11AP62491 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB11AP62491 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB11AP62491 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
RAB11AP62491 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.03□□□□□ -0.16
RAB11AP62491 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.03□□□□□ -0.16
RAB11AP62491 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.03□□□□□ -0.16
RAB11AP62491 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.03□□□□□ -0.16
RAB11AP62491 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB11AP62491 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB11AP62491 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB11AP62491 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RAB11AP62491 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB11AP62491 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB11AP62491 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB11AP62491 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RAB11AP62491 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB11AP62491 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB11AP62491 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB11AP62491 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB11AP62491 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
RAB11AP62491 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
RAB11AP62491 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB11AP62491 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB11AP62491 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RAB11AP62491 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB11AP62491 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.02□□□□□ -0.16
RAB11AP62491 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB11AP62491 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB11AP62491 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB11AP62491 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.02□□□□□ -0.16
RAB11AP62491 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB11AP62491 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB11AP62491 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RAB11AP62491 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB11AP62491 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB11AP62491 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB11AP62491 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB11AP62491 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB11AP62491 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.02□□□□□ -0.16
RAB11AP62491 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB11AP62491 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.02□□□□□ -0.17
RAB11AP62491 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB11AP62491 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.02□□□□□ -0.17
RAB11AP62491 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB11AP62491 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.02□□□□□ -0.17
RAB11AP62491 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.02□□□□□ -0.17
RAB11AP62491 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RAB11AP62491 AC005104.2-201ENST00000427818 678 ntBASIC14.02□□□□□ -0.17
RAB11AP62491 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB11AP62491 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB11AP62491 TSPY20P-201ENST00000450910 630 ntBASIC14.02□□□□□ -0.17
RAB11AP62491 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB11AP62491 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB11AP62491 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB11AP62491 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB11AP62491 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms