Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.15■□□□□ 0.02
UBE2NP61088 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
UBE2NP61088 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.14■□□□□ 0.01
UBE2NP61088 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.14■□□□□ 0.01
UBE2NP61088 ACTG1P4-201ENST00000425123 1122 ntBASIC15.14■□□□□ 0.01
UBE2NP61088 HNRNPDP1-201ENST00000439535 754 ntBASIC15.14■□□□□ 0.01
UBE2NP61088 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.14■□□□□ 0.01
UBE2NP61088 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.14■□□□□ 0.01
UBE2NP61088 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.14■□□□□ 0.01
UBE2NP61088 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.14■□□□□ 0.01
UBE2NP61088 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.14■□□□□ 0.01
UBE2NP61088 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.14■□□□□ 0.01
UBE2NP61088 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.14■□□□□ 0.01
UBE2NP61088 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.14■□□□□ 0.01
UBE2NP61088 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
UBE2NP61088 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.14■□□□□ 0.01
UBE2NP61088 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 AC016396.2-201ENST00000562575 1417 ntBASIC15.14■□□□□ 0.01
UBE2NP61088 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
UBE2NP61088 HLA-A-201ENST00000376802 1334 ntBASIC15.14■□□□□ 0.01
UBE2NP61088 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
UBE2NP61088 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.14■□□□□ 0.01
UBE2NP61088 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
UBE2NP61088 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2NP61088 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.13■□□□□ 0.01
UBE2NP61088 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.13■□□□□ 0.01
UBE2NP61088 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.13■□□□□ 0.01
UBE2NP61088 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2NP61088 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.13■□□□□ 0.01
UBE2NP61088 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2NP61088 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2NP61088 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2NP61088 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBE2NP61088 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2NP61088 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2NP61088 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2NP61088 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2NP61088 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.13■□□□□ 0.01
UBE2NP61088 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.13■□□□□ 0.01
UBE2NP61088 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
UBE2NP61088 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.13■□□□□ 0.01
UBE2NP61088 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.13■□□□□ 0.01
UBE2NP61088 AL139424.1-201ENST00000607572 797 ntBASIC15.13■□□□□ 0.01
UBE2NP61088 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2NP61088 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2NP61088 PGM5P2-202ENST00000637225 1043 ntBASIC15.13■□□□□ 0.01
UBE2NP61088 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.13■□□□□ 0.01
UBE2NP61088 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2NP61088 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2NP61088 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
UBE2NP61088 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2NP61088 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2NP61088 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2NP61088 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2NP61088 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBE2NP61088 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.13■□□□□ 0.01
UBE2NP61088 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
UBE2NP61088 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2NP61088 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2NP61088 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.12■□□□□ 0.01
UBE2NP61088 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
UBE2NP61088 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2NP61088 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2NP61088 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2NP61088 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
UBE2NP61088 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.12■□□□□ 0.01
UBE2NP61088 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2NP61088 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2NP61088 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2NP61088 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2NP61088 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2NP61088 AC092910.1-201ENST00000482027 1129 ntBASIC15.12■□□□□ 0.01
UBE2NP61088 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.12■□□□□ 0.01
UBE2NP61088 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2NP61088 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
UBE2NP61088 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
UBE2NP61088 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
UBE2NP61088 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2NP61088 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2NP61088 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms