Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SRP54P61011 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SRP54P61011 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SRP54P61011 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.97■□□□□ 0.31
SRP54P61011 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SRP54P61011 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
SRP54P61011 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SRP54P61011 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP54P61011 AL355312.1-201ENST00000407115 2176 ntBASIC16.96■□□□□ 0.31
SRP54P61011 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.96■□□□□ 0.31
SRP54P61011 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SRP54P61011 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
SRP54P61011 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.96■□□□□ 0.31
SRP54P61011 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SRP54P61011 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.96■□□□□ 0.31
SRP54P61011 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SRP54P61011 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.96■□□□□ 0.31
SRP54P61011 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.96■□□□□ 0.31
SRP54P61011 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.96■□□□□ 0.31
SRP54P61011 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.96■□□□□ 0.31
SRP54P61011 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.96■□□□□ 0.31
SRP54P61011 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.96■□□□□ 0.31
SRP54P61011 AC055717.3-201ENST00000622967 595 ntBASIC16.96■□□□□ 0.31
SRP54P61011 AC002310.6-201ENST00000624451 1377 ntBASIC16.96■□□□□ 0.31
SRP54P61011 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRP54P61011 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRP54P61011 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRP54P61011 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRP54P61011 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRP54P61011 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SRP54P61011 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.96■□□□□ 0.3
SRP54P61011 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP54P61011 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP54P61011 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP54P61011 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP54P61011 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SRP54P61011 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.95■□□□□ 0.3
SRP54P61011 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP54P61011 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SRP54P61011 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP54P61011 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SRP54P61011 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.95■□□□□ 0.3
SRP54P61011 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
SRP54P61011 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP54P61011 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SRP54P61011 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP54P61011 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SRP54P61011 IGLL3P-201ENST00000412472 434 ntBASIC16.95■□□□□ 0.3
SRP54P61011 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.95■□□□□ 0.3
SRP54P61011 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.95■□□□□ 0.3
SRP54P61011 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.95■□□□□ 0.3
SRP54P61011 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SRP54P61011 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.95■□□□□ 0.3
SRP54P61011 OR7E47P-204ENST00000575924 449 ntBASIC16.95■□□□□ 0.3
SRP54P61011 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.95■□□□□ 0.3
SRP54P61011 AL691403.2-201ENST00000618460 490 ntBASIC16.95■□□□□ 0.3
SRP54P61011 AC092865.6-201ENST00000642101 219 ntBASIC16.95■□□□□ 0.3
SRP54P61011 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SRP54P61011 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP54P61011 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
SRP54P61011 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP54P61011 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SRP54P61011 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRP54P61011 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.95■□□□□ 0.3
SRP54P61011 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SRP54P61011 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.95■□□□□ 0.3
SRP54P61011 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
SRP54P61011 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.94■□□□□ 0.3
SRP54P61011 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP54P61011 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.94■□□□□ 0.3
SRP54P61011 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SRP54P61011 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SRP54P61011 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP54P61011 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SRP54P61011 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.94■□□□□ 0.3
SRP54P61011 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.94■□□□□ 0.3
SRP54P61011 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
SRP54P61011 MCCD1P2-201ENST00000423228 335 ntBASIC16.94■□□□□ 0.3
SRP54P61011 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.94■□□□□ 0.3
SRP54P61011 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms