Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.68■■□□□ 1.06
KCNQ4P56696 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
KCNQ4P56696 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
KCNQ4P56696 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.67■■□□□ 1.06
KCNQ4P56696 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.67■■□□□ 1.06
KCNQ4P56696 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.67■■□□□ 1.06
KCNQ4P56696 AC138969.3-201ENST00000546612 1459 ntBASIC21.67■■□□□ 1.06
KCNQ4P56696 AC138932.2-201ENST00000548268 1459 ntBASIC21.67■■□□□ 1.06
KCNQ4P56696 AC126755.4-201ENST00000549796 1459 ntBASIC21.67■■□□□ 1.06
KCNQ4P56696 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.67■■□□□ 1.06
KCNQ4P56696 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
KCNQ4P56696 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 GPR53P-205ENST00000457298 1084 ntBASIC21.67■■□□□ 1.06
KCNQ4P56696 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.67■■□□□ 1.06
KCNQ4P56696 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
KCNQ4P56696 STOM-203ENST00000538954 1257 ntTSL 5 BASIC21.67■■□□□ 1.06
KCNQ4P56696 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 RARRES2P9-201ENST00000565168 469 ntBASIC21.67■■□□□ 1.06
KCNQ4P56696 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 AL132655.2-201ENST00000596276 594 ntBASIC21.67■■□□□ 1.06
KCNQ4P56696 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.67■■□□□ 1.06
KCNQ4P56696 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KCNQ4P56696 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.67■■□□□ 1.06
KCNQ4P56696 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ4P56696 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ4P56696 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ4P56696 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ4P56696 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.66■■□□□ 1.06
KCNQ4P56696 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ4P56696 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ4P56696 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC21.66■■□□□ 1.06
KCNQ4P56696 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ4P56696 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ4P56696 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21.66■■□□□ 1.06
KCNQ4P56696 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ4P56696 AC142381.1-201ENST00000426099 345 ntBASIC21.66■■□□□ 1.06
KCNQ4P56696 GNAQP1-201ENST00000444815 1067 ntBASIC21.66■■□□□ 1.06
KCNQ4P56696 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ4P56696 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.66■■□□□ 1.06
KCNQ4P56696 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.66■■□□□ 1.06
KCNQ4P56696 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.66■■□□□ 1.06
KCNQ4P56696 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ4P56696 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
KCNQ4P56696 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21.66■■□□□ 1.06
KCNQ4P56696 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
KCNQ4P56696 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ4P56696 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
KCNQ4P56696 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.66■■□□□ 1.06
KCNQ4P56696 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ4P56696 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KCNQ4P56696 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ4P56696 LYSMD4-203ENST00000378904 2122 ntBASIC21.65■■□□□ 1.06
KCNQ4P56696 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ4P56696 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ4P56696 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
KCNQ4P56696 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ4P56696 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ4P56696 DGCR5-201ENST00000399539 862 ntBASIC21.65■■□□□ 1.06
KCNQ4P56696 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ4P56696 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC21.65■■□□□ 1.06
KCNQ4P56696 AC009477.1-201ENST00000452936 217 ntBASIC21.65■■□□□ 1.06
KCNQ4P56696 INE1-201ENST00000456273 945 ntBASIC21.65■■□□□ 1.06
KCNQ4P56696 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC21.65■■□□□ 1.06
KCNQ4P56696 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC21.65■■□□□ 1.06
KCNQ4P56696 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.65■■□□□ 1.06
KCNQ4P56696 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ4P56696 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ4P56696 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.65■■□□□ 1.06
KCNQ4P56696 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.65■■□□□ 1.06
KCNQ4P56696 AC132938.2-201ENST00000579188 680 ntBASIC21.65■■□□□ 1.06
KCNQ4P56696 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.65■■□□□ 1.06
KCNQ4P56696 AL591163.1-201ENST00000641757 987 ntBASIC21.65■■□□□ 1.06
KCNQ4P56696 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ4P56696 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ4P56696 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
KCNQ4P56696 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ4P56696 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KCNQ4P56696 AL353732.1-201ENST00000569618 1459 ntBASIC21.64■■□□□ 1.06
KCNQ4P56696 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
KCNQ4P56696 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KCNQ4P56696 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ4P56696 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
KCNQ4P56696 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KCNQ4P56696 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.64■■□□□ 1.05
KCNQ4P56696 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC21.64■■□□□ 1.05
KCNQ4P56696 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
KCNQ4P56696 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms