Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOC4P55056 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
APOC4P55056 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
APOC4P55056 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.59□□□□□ -0.39
APOC4P55056 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.59□□□□□ -0.39
APOC4P55056 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
APOC4P55056 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.59□□□□□ -0.39
APOC4P55056 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
APOC4P55056 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
APOC4P55056 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
APOC4P55056 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.59□□□□□ -0.39
APOC4P55056 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.59□□□□□ -0.39
APOC4P55056 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
APOC4P55056 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.59□□□□□ -0.39
APOC4P55056 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.59□□□□□ -0.39
APOC4P55056 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.59□□□□□ -0.39
APOC4P55056 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.59□□□□□ -0.39
APOC4P55056 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.59□□□□□ -0.39
APOC4P55056 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
APOC4P55056 MTDHP5-201ENST00000598980 586 ntBASIC12.59□□□□□ -0.39
APOC4P55056 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
APOC4P55056 AC007064.4-201ENST00000637740 555 ntBASIC12.59□□□□□ -0.39
APOC4P55056 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 AC016396.2-201ENST00000562575 1417 ntBASIC12.59□□□□□ -0.39
APOC4P55056 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
APOC4P55056 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
APOC4P55056 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC12.59□□□□□ -0.39
APOC4P55056 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
APOC4P55056 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC4P55056 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
APOC4P55056 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.58□□□□□ -0.39
APOC4P55056 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
APOC4P55056 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.58□□□□□ -0.39
APOC4P55056 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
APOC4P55056 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
APOC4P55056 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.58□□□□□ -0.4
APOC4P55056 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC4P55056 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC12.58□□□□□ -0.4
APOC4P55056 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
APOC4P55056 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC4P55056 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.58□□□□□ -0.4
APOC4P55056 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.58□□□□□ -0.4
APOC4P55056 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.58□□□□□ -0.4
APOC4P55056 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.58□□□□□ -0.4
APOC4P55056 AC004832.2-201ENST00000426397 482 ntBASIC12.58□□□□□ -0.4
APOC4P55056 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.58□□□□□ -0.4
APOC4P55056 PGAM5P1-201ENST00000518923 814 ntBASIC12.58□□□□□ -0.4
APOC4P55056 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
APOC4P55056 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.58□□□□□ -0.4
APOC4P55056 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC4P55056 AC006538.3-201ENST00000612495 578 ntBASIC12.58□□□□□ -0.4
APOC4P55056 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.58□□□□□ -0.4
APOC4P55056 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
APOC4P55056 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
APOC4P55056 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
APOC4P55056 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
APOC4P55056 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC4P55056 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
APOC4P55056 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC4P55056 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC4P55056 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms