Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.13■□□□□ 0.49
TUBP50607 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.13■□□□□ 0.49
TUBP50607 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBP50607 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBP50607 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBP50607 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBP50607 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBP50607 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.13■□□□□ 0.49
TUBP50607 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TUBP50607 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.13■□□□□ 0.49
TUBP50607 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TUBP50607 AL353135.1-201ENST00000606729 504 ntBASIC18.13■□□□□ 0.49
TUBP50607 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.13■□□□□ 0.49
TUBP50607 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBP50607 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBP50607 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TUBP50607 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBP50607 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.13■□□□□ 0.49
TUBP50607 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBP50607 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TUBP50607 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBP50607 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBP50607 OR6D1P-202ENST00000641007 5290 ntBASIC18.13■□□□□ 0.49
TUBP50607 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.13■□□□□ 0.49
TUBP50607 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TUBP50607 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.12■□□□□ 0.49
TUBP50607 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBP50607 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBP50607 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TUBP50607 AC046185.3-201ENST00000623228 1824 ntBASIC18.12■□□□□ 0.49
TUBP50607 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.12■□□□□ 0.49
TUBP50607 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBP50607 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBP50607 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBP50607 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBP50607 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBP50607 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBP50607 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBP50607 LINC00982-205ENST00000420957 435 ntBASIC18.12■□□□□ 0.49
TUBP50607 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.12■□□□□ 0.49
TUBP50607 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBP50607 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBP50607 AC023511.2-201ENST00000618803 211 ntBASIC18.12■□□□□ 0.49
TUBP50607 AL805961.1-202ENST00000641562 540 ntBASIC18.12■□□□□ 0.49
TUBP50607 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBP50607 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.12■□□□□ 0.49
TUBP50607 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBP50607 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBP50607 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBP50607 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBP50607 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBP50607 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TUBP50607 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBP50607 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TUBP50607 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
TUBP50607 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TUBP50607 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.11■□□□□ 0.49
TUBP50607 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.11■□□□□ 0.49
TUBP50607 AC008667.4-201ENST00000607370 168 ntBASIC18.11■□□□□ 0.49
TUBP50607 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TUBP50607 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.11■□□□□ 0.49
TUBP50607 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.11■□□□□ 0.49
TUBP50607 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TUBP50607 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TUBP50607 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.11■□□□□ 0.49
TUBP50607 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TUBP50607 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBP50607 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBP50607 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBP50607 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBP50607 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBP50607 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBP50607 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBP50607 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TUBP50607 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBP50607 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TUBP50607 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.1■□□□□ 0.49
TUBP50607 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TUBP50607 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBP50607 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.1■□□□□ 0.49
TUBP50607 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TUBP50607 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms