Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC11.64□□□□□ -0.55
CXCL5P42830 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC11.64□□□□□ -0.55
CXCL5P42830 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC11.64□□□□□ -0.55
CXCL5P42830 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC11.64□□□□□ -0.55
CXCL5P42830 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 Telomerase-vert.1-201ENST00000363312 438 ntBASIC11.64□□□□□ -0.55
CXCL5P42830 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC11.64□□□□□ -0.55
CXCL5P42830 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC11.64□□□□□ -0.55
CXCL5P42830 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
CXCL5P42830 ECEL1P2-202ENST00000465689 757 ntBASIC11.64□□□□□ -0.55
CXCL5P42830 PPOX-214ENST00000535223 664 ntTSL 3 BASIC11.64□□□□□ -0.55
CXCL5P42830 AC124947.2-201ENST00000547118 1133 ntBASIC11.64□□□□□ -0.55
CXCL5P42830 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC11.64□□□□□ -0.55
CXCL5P42830 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC11.64□□□□□ -0.55
CXCL5P42830 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC11.64□□□□□ -0.55
CXCL5P42830 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC11.64□□□□□ -0.55
CXCL5P42830 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC11.64□□□□□ -0.55
CXCL5P42830 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.64□□□□□ -0.55
CXCL5P42830 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC11.64□□□□□ -0.55
CXCL5P42830 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CXCL5P42830 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC11.64□□□□□ -0.55
CXCL5P42830 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.64□□□□□ -0.55
CXCL5P42830 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC11.64□□□□□ -0.55
CXCL5P42830 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CXCL5P42830 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC11.64□□□□□ -0.55
CXCL5P42830 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CXCL5P42830 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
CXCL5P42830 AC060834.1-201ENST00000443027 2032 ntBASIC11.64□□□□□ -0.55
CXCL5P42830 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
CXCL5P42830 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CXCL5P42830 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC11.64□□□□□ -0.55
CXCL5P42830 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC11.63□□□□□ -0.55
CXCL5P42830 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC11.63□□□□□ -0.55
CXCL5P42830 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CXCL5P42830 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
CXCL5P42830 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC11.63□□□□□ -0.55
CXCL5P42830 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC11.63□□□□□ -0.55
CXCL5P42830 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
CXCL5P42830 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 AC023824.1-201ENST00000562945 2975 ntBASIC11.63□□□□□ -0.55
CXCL5P42830 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC11.63□□□□□ -0.55
CXCL5P42830 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.63□□□□□ -0.55
CXCL5P42830 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC11.63□□□□□ -0.55
CXCL5P42830 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
CXCL5P42830 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC11.63□□□□□ -0.55
CXCL5P42830 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC11.63□□□□□ -0.55
CXCL5P42830 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC11.63□□□□□ -0.55
CXCL5P42830 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 AC098590.1-201ENST00000468126 897 ntBASIC11.63□□□□□ -0.55
CXCL5P42830 CNP-204ENST00000472031 1019 ntTSL 2 BASIC11.63□□□□□ -0.55
CXCL5P42830 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC11.63□□□□□ -0.55
CXCL5P42830 IGHV3-52-201ENST00000519770 353 ntBASIC11.63□□□□□ -0.55
CXCL5P42830 RPS20-210ENST00000523936 899 ntTSL 2 BASIC11.63□□□□□ -0.55
CXCL5P42830 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC11.63□□□□□ -0.55
CXCL5P42830 CLN6-221ENST00000637494 765 ntTSL 5 BASIC11.63□□□□□ -0.55
CXCL5P42830 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC11.63□□□□□ -0.55
CXCL5P42830 AGK-211ENST00000629555 2765 ntTSL 5 BASIC11.63□□□□□ -0.55
CXCL5P42830 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CXCL5P42830 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms