Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCNFP41002 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNFP41002 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNFP41002 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.33■□□□□ 0.36
CCNFP41002 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCNFP41002 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCNFP41002 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CCNFP41002 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNFP41002 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.32■□□□□ 0.36
CCNFP41002 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
CCNFP41002 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNFP41002 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNFP41002 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCNFP41002 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNFP41002 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CCNFP41002 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNFP41002 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.32■□□□□ 0.36
CCNFP41002 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNFP41002 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNFP41002 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.32■□□□□ 0.36
CCNFP41002 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCNFP41002 AC009533.2-201ENST00000543664 586 ntBASIC17.32■□□□□ 0.36
CCNFP41002 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.32■□□□□ 0.36
CCNFP41002 AC092119.3-201ENST00000612618 583 ntBASIC17.32■□□□□ 0.36
CCNFP41002 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCNFP41002 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNFP41002 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCNFP41002 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNFP41002 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.32■□□□□ 0.36
CCNFP41002 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.32■□□□□ 0.36
CCNFP41002 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCNFP41002 AC103702.1-201ENST00000548801 2630 ntBASIC17.32■□□□□ 0.36
CCNFP41002 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNFP41002 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCNFP41002 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNFP41002 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNFP41002 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCNFP41002 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCNFP41002 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNFP41002 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CCNFP41002 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCNFP41002 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.31■□□□□ 0.36
CCNFP41002 KRT17P6-201ENST00000453795 1220 ntBASIC17.31■□□□□ 0.36
CCNFP41002 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CCNFP41002 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.31■□□□□ 0.36
CCNFP41002 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.31■□□□□ 0.36
CCNFP41002 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.31■□□□□ 0.36
CCNFP41002 AC012615.1-201ENST00000565797 1299 ntBASIC17.31■□□□□ 0.36
CCNFP41002 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.31■□□□□ 0.36
CCNFP41002 AC005336.2-201ENST00000593183 939 ntBASIC17.31■□□□□ 0.36
CCNFP41002 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.31■□□□□ 0.36
CCNFP41002 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.31■□□□□ 0.36
CCNFP41002 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNFP41002 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCNFP41002 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCNFP41002 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNFP41002 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.31■□□□□ 0.36
CCNFP41002 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.31■□□□□ 0.36
CCNFP41002 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCNFP41002 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNFP41002 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNFP41002 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCNFP41002 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.3■□□□□ 0.36
CCNFP41002 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.3■□□□□ 0.36
CCNFP41002 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNFP41002 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNFP41002 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCNFP41002 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNFP41002 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNFP41002 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNFP41002 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNFP41002 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CCNFP41002 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNFP41002 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNFP41002 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CCNFP41002 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.3■□□□□ 0.36
CCNFP41002 MINOS1P3-201ENST00000457048 203 ntBASIC17.3■□□□□ 0.36
CCNFP41002 AC104819.1-201ENST00000504587 486 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms