Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
SOX6P35712 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SOX6P35712 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SOX6P35712 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX6P35712 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.48■□□□□ 0.07
SOX6P35712 KRT18P23-201ENST00000435622 1283 ntBASIC15.48■□□□□ 0.07
SOX6P35712 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SOX6P35712 FAM207BP-201ENST00000447172 505 ntBASIC15.48■□□□□ 0.07
SOX6P35712 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.48■□□□□ 0.07
SOX6P35712 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.48■□□□□ 0.07
SOX6P35712 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SOX6P35712 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.48■□□□□ 0.07
SOX6P35712 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX6P35712 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX6P35712 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SOX6P35712 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SOX6P35712 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.48■□□□□ 0.07
SOX6P35712 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX6P35712 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SOX6P35712 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
SOX6P35712 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SOX6P35712 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.47■□□□□ 0.07
SOX6P35712 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.47■□□□□ 0.07
SOX6P35712 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SOX6P35712 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SOX6P35712 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.47■□□□□ 0.07
SOX6P35712 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.47■□□□□ 0.07
SOX6P35712 AL353807.1-201ENST00000427475 662 ntBASIC15.47■□□□□ 0.07
SOX6P35712 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.47■□□□□ 0.07
SOX6P35712 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.47■□□□□ 0.07
SOX6P35712 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
SOX6P35712 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.47■□□□□ 0.07
SOX6P35712 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.47■□□□□ 0.07
SOX6P35712 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
SOX6P35712 AC008687.5-201ENST00000593746 558 ntBASIC15.47■□□□□ 0.07
SOX6P35712 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SOX6P35712 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.47■□□□□ 0.07
SOX6P35712 AP006294.2-201ENST00000641667 209 ntBASIC15.47■□□□□ 0.07
SOX6P35712 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.47■□□□□ 0.07
SOX6P35712 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.47■□□□□ 0.07
SOX6P35712 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SOX6P35712 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.47■□□□□ 0.07
SOX6P35712 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.47■□□□□ 0.07
SOX6P35712 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
SOX6P35712 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.47■□□□□ 0.07
SOX6P35712 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SOX6P35712 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
SOX6P35712 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.46■□□□□ 0.07
SOX6P35712 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.46■□□□□ 0.07
SOX6P35712 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SOX6P35712 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 AL135905.2-201ENST00000584934 1404 ntBASIC15.46■□□□□ 0.07
SOX6P35712 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
SOX6P35712 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
SOX6P35712 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.46■□□□□ 0.07
SOX6P35712 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.46■□□□□ 0.07
SOX6P35712 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SOX6P35712 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.46■□□□□ 0.07
SOX6P35712 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SOX6P35712 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.46■□□□□ 0.07
SOX6P35712 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
SOX6P35712 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms