Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN7P35236 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN7P35236 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.78■□□□□ 0.44
PTPN7P35236 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PTPN7P35236 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN7P35236 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN7P35236 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN7P35236 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
PTPN7P35236 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PTPN7P35236 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
PTPN7P35236 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PTPN7P35236 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PTPN7P35236 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PTPN7P35236 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN7P35236 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN7P35236 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PTPN7P35236 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
PTPN7P35236 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN7P35236 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN7P35236 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.77■□□□□ 0.44
PTPN7P35236 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN7P35236 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PTPN7P35236 AL603756.1-201ENST00000606511 2163 ntBASIC17.77■□□□□ 0.44
PTPN7P35236 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.77■□□□□ 0.44
PTPN7P35236 AC079776.2-201ENST00000641154 1609 ntBASIC17.77■□□□□ 0.44
PTPN7P35236 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPN7P35236 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN7P35236 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN7P35236 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN7P35236 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.77■□□□□ 0.44
PTPN7P35236 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
PTPN7P35236 AP002414.1-201ENST00000391405 1147 ntBASIC17.77■□□□□ 0.44
PTPN7P35236 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN7P35236 ATP5G2P1-201ENST00000433580 426 ntBASIC17.77■□□□□ 0.44
PTPN7P35236 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPN7P35236 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.77■□□□□ 0.44
PTPN7P35236 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.77■□□□□ 0.44
PTPN7P35236 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.77■□□□□ 0.44
PTPN7P35236 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PTPN7P35236 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN7P35236 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPN7P35236 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PTPN7P35236 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN7P35236 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
PTPN7P35236 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN7P35236 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
PTPN7P35236 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN7P35236 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN7P35236 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN7P35236 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN7P35236 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN7P35236 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN7P35236 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN7P35236 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN7P35236 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN7P35236 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN7P35236 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PTPN7P35236 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN7P35236 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN7P35236 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN7P35236 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PTPN7P35236 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.76■□□□□ 0.43
PTPN7P35236 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.76■□□□□ 0.43
PTPN7P35236 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.76■□□□□ 0.43
PTPN7P35236 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.76■□□□□ 0.43
PTPN7P35236 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.76■□□□□ 0.43
PTPN7P35236 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.76■□□□□ 0.43
PTPN7P35236 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN7P35236 AC069148.1-201ENST00000608741 768 ntBASIC17.76■□□□□ 0.43
PTPN7P35236 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN7P35236 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN7P35236 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PTPN7P35236 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN7P35236 PCDHB17P-201ENST00000539533 2393 ntBASIC17.76■□□□□ 0.43
PTPN7P35236 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN7P35236 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN7P35236 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN7P35236 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN7P35236 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
PTPN7P35236 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN7P35236 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN7P35236 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PTPN7P35236 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN7P35236 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
PTPN7P35236 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN7P35236 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN7P35236 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN7P35236 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN7P35236 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PTPN7P35236 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN7P35236 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PTPN7P35236 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN7P35236 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN7P35236 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN7P35236 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
PTPN7P35236 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN7P35236 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN7P35236 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN7P35236 AP000867.3-201ENST00000524675 377 ntBASIC17.75■□□□□ 0.43
PTPN7P35236 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms