Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.83■□□□□ 0.92
KCNA3P22001 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
KCNA3P22001 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
KCNA3P22001 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.83■□□□□ 0.92
KCNA3P22001 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
KCNA3P22001 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KCNA3P22001 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNA3P22001 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNA3P22001 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNA3P22001 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.82■□□□□ 0.92
KCNA3P22001 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
KCNA3P22001 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNA3P22001 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
KCNA3P22001 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNA3P22001 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
KCNA3P22001 RN7SL752P-201ENST00000463779 287 ntBASIC20.82■□□□□ 0.92
KCNA3P22001 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.82■□□□□ 0.92
KCNA3P22001 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.82■□□□□ 0.92
KCNA3P22001 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.82■□□□□ 0.92
KCNA3P22001 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNA3P22001 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNA3P22001 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
KCNA3P22001 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNA3P22001 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.81■□□□□ 0.92
KCNA3P22001 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
KCNA3P22001 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
KCNA3P22001 AC105233.2-201ENST00000523697 349 ntBASIC20.81■□□□□ 0.92
KCNA3P22001 AF228730.5-201ENST00000530288 346 ntBASIC20.81■□□□□ 0.92
KCNA3P22001 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.81■□□□□ 0.92
KCNA3P22001 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
KCNA3P22001 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.81■□□□□ 0.92
KCNA3P22001 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNA3P22001 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNA3P22001 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNA3P22001 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.81■□□□□ 0.92
KCNA3P22001 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNA3P22001 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNA3P22001 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNA3P22001 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.81■□□□□ 0.92
KCNA3P22001 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNA3P22001 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
KCNA3P22001 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.81■□□□□ 0.92
KCNA3P22001 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNA3P22001 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.81■□□□□ 0.92
KCNA3P22001 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNA3P22001 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNA3P22001 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KCNA3P22001 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNA3P22001 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.8■□□□□ 0.92
KCNA3P22001 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNA3P22001 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNA3P22001 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KCNA3P22001 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.8■□□□□ 0.92
KCNA3P22001 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KCNA3P22001 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNA3P22001 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNA3P22001 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNA3P22001 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNA3P22001 AP006294.1-201ENST00000415407 339 ntBASIC20.8■□□□□ 0.92
KCNA3P22001 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNA3P22001 AC092658.1-201ENST00000505836 891 ntBASIC20.8■□□□□ 0.92
KCNA3P22001 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNA3P22001 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
KCNA3P22001 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNA3P22001 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
KCNA3P22001 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNA3P22001 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNA3P22001 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.79■□□□□ 0.92
KCNA3P22001 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KCNA3P22001 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.79■□□□□ 0.92
KCNA3P22001 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNA3P22001 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
KCNA3P22001 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KCNA3P22001 DFFBP1-201ENST00000433250 979 ntBASIC20.79■□□□□ 0.92
KCNA3P22001 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.79■□□□□ 0.92
KCNA3P22001 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.79■□□□□ 0.92
KCNA3P22001 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.79■□□□□ 0.92
KCNA3P22001 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.79■□□□□ 0.92
KCNA3P22001 AC119751.2-201ENST00000504529 210 ntBASIC20.79■□□□□ 0.92
KCNA3P22001 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.79■□□□□ 0.92
KCNA3P22001 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.79■□□□□ 0.92
KCNA3P22001 WASH4P-201ENST00000564273 1246 ntBASIC20.79■□□□□ 0.92
KCNA3P22001 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNA3P22001 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.79■□□□□ 0.92
KCNA3P22001 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.79■□□□□ 0.92
KCNA3P22001 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KCNA3P22001 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.79■□□□□ 0.92
KCNA3P22001 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.79■□□□□ 0.92
KCNA3P22001 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNA3P22001 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
KCNA3P22001 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
KCNA3P22001 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KCNA3P22001 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNA3P22001 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.78■□□□□ 0.92
KCNA3P22001 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KCNA3P22001 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.78■□□□□ 0.92
KCNA3P22001 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNA3P22001 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNA3P22001 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNA3P22001 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms