Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.23□□□□□ -0.29
RAB4AP20338 AC097658.1-201ENST00000475555 843 ntBASIC13.23□□□□□ -0.29
RAB4AP20338 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.23□□□□□ -0.29
RAB4AP20338 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.23□□□□□ -0.29
RAB4AP20338 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.23□□□□□ -0.29
RAB4AP20338 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.23□□□□□ -0.29
RAB4AP20338 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.23□□□□□ -0.29
RAB4AP20338 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RAB4AP20338 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB4AP20338 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.23□□□□□ -0.29
RAB4AP20338 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 AC138035.3-201ENST00000622706 2791 ntBASIC13.23□□□□□ -0.29
RAB4AP20338 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.23□□□□□ -0.29
RAB4AP20338 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RAB4AP20338 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB4AP20338 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RAB4AP20338 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.23□□□□□ -0.29
RAB4AP20338 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RAB4AP20338 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB4AP20338 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB4AP20338 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB4AP20338 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB4AP20338 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.22□□□□□ -0.29
RAB4AP20338 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RAB4AP20338 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB4AP20338 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB4AP20338 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.22□□□□□ -0.29
RAB4AP20338 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.22□□□□□ -0.29
RAB4AP20338 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.22□□□□□ -0.29
RAB4AP20338 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.22□□□□□ -0.29
RAB4AP20338 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.22□□□□□ -0.29
RAB4AP20338 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.22□□□□□ -0.29
RAB4AP20338 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB4AP20338 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB4AP20338 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RAB4AP20338 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
RAB4AP20338 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB4AP20338 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB4AP20338 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB4AP20338 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB4AP20338 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RAB4AP20338 CYP2T1P-202ENST00000641596 2535 ntBASIC13.21□□□□□ -0.29
RAB4AP20338 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RAB4AP20338 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB4AP20338 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB4AP20338 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RAB4AP20338 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB4AP20338 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB4AP20338 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB4AP20338 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB4AP20338 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RAB4AP20338 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB4AP20338 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB4AP20338 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB4AP20338 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB4AP20338 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.21□□□□□ -0.29
RAB4AP20338 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB4AP20338 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB4AP20338 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB4AP20338 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB4AP20338 AC005252.3-201ENST00000623855 2258 ntBASIC13.21□□□□□ -0.29
RAB4AP20338 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB4AP20338 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB4AP20338 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms