Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.49■□□□□ 0.39
NFKB1P19838 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NFKB1P19838 FRMD8P1-201ENST00000440433 1524 ntBASIC17.49■□□□□ 0.39
NFKB1P19838 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.49■□□□□ 0.39
NFKB1P19838 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.49■□□□□ 0.39
NFKB1P19838 PRYP5-201ENST00000451909 266 ntBASIC17.49■□□□□ 0.39
NFKB1P19838 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 SART3-203ENST00000546611 1184 ntBASIC17.49■□□□□ 0.39
NFKB1P19838 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.49■□□□□ 0.39
NFKB1P19838 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.49■□□□□ 0.39
NFKB1P19838 AC064862.7-201ENST00000604520 867 ntBASIC17.49■□□□□ 0.39
NFKB1P19838 IFNL4P1-201ENST00000607083 540 ntBASIC17.49■□□□□ 0.39
NFKB1P19838 AL022326.1-202ENST00000641533 845 ntBASIC17.49■□□□□ 0.39
NFKB1P19838 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.49■□□□□ 0.39
NFKB1P19838 AC105020.1-201ENST00000435356 2205 ntBASIC17.49■□□□□ 0.39
NFKB1P19838 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.49■□□□□ 0.39
NFKB1P19838 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.49■□□□□ 0.39
NFKB1P19838 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.49■□□□□ 0.39
NFKB1P19838 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.48■□□□□ 0.39
NFKB1P19838 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.48■□□□□ 0.39
NFKB1P19838 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NFKB1P19838 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NFKB1P19838 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NFKB1P19838 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NFKB1P19838 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NFKB1P19838 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NFKB1P19838 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NFKB1P19838 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NFKB1P19838 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NFKB1P19838 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NFKB1P19838 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NFKB1P19838 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.48■□□□□ 0.39
NFKB1P19838 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NFKB1P19838 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NFKB1P19838 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.48■□□□□ 0.39
NFKB1P19838 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NFKB1P19838 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.48■□□□□ 0.39
NFKB1P19838 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NFKB1P19838 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.48■□□□□ 0.39
NFKB1P19838 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.48■□□□□ 0.39
NFKB1P19838 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.48■□□□□ 0.39
NFKB1P19838 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NFKB1P19838 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NFKB1P19838 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NFKB1P19838 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.48■□□□□ 0.39
NFKB1P19838 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NFKB1P19838 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.48■□□□□ 0.39
NFKB1P19838 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NFKB1P19838 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NFKB1P19838 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NFKB1P19838 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NFKB1P19838 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.47■□□□□ 0.39
NFKB1P19838 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.47■□□□□ 0.39
NFKB1P19838 SAPCD2P3-201ENST00000455031 850 ntBASIC17.47■□□□□ 0.39
NFKB1P19838 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NFKB1P19838 AF238378.1-201ENST00000526806 358 ntBASIC17.47■□□□□ 0.39
NFKB1P19838 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.47■□□□□ 0.39
NFKB1P19838 LINC01711-201ENST00000598340 967 ntBASIC17.47■□□□□ 0.39
NFKB1P19838 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.47■□□□□ 0.39
NFKB1P19838 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NFKB1P19838 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NFKB1P19838 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.47■□□□□ 0.39
NFKB1P19838 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.47■□□□□ 0.39
NFKB1P19838 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NFKB1P19838 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NFKB1P19838 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NFKB1P19838 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NFKB1P19838 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NFKB1P19838 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NFKB1P19838 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NFKB1P19838 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NFKB1P19838 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NFKB1P19838 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NFKB1P19838 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NFKB1P19838 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NFKB1P19838 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms