Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.04□□□□□ -0.16
DEFA4P12838 TMPOP1-202ENST00000424642 1267 ntBASIC14.04□□□□□ -0.16
DEFA4P12838 DDX43P3-201ENST00000441064 443 ntBASIC14.04□□□□□ -0.16
DEFA4P12838 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
DEFA4P12838 KRT18P38-201ENST00000449496 1282 ntBASIC14.04□□□□□ -0.16
DEFA4P12838 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 AC005332.3-201ENST00000589904 676 ntBASIC14.04□□□□□ -0.16
DEFA4P12838 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
DEFA4P12838 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
DEFA4P12838 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
DEFA4P12838 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
DEFA4P12838 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
DEFA4P12838 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
DEFA4P12838 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.03□□□□□ -0.16
DEFA4P12838 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.03□□□□□ -0.16
DEFA4P12838 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
DEFA4P12838 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
DEFA4P12838 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.03□□□□□ -0.16
DEFA4P12838 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
DEFA4P12838 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
DEFA4P12838 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.03□□□□□ -0.16
DEFA4P12838 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.03□□□□□ -0.16
DEFA4P12838 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
DEFA4P12838 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.03□□□□□ -0.16
DEFA4P12838 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.03□□□□□ -0.16
DEFA4P12838 AC104076.2-201ENST00000448912 469 ntBASIC14.03□□□□□ -0.16
DEFA4P12838 AL671277.2-201ENST00000458060 996 ntBASIC14.03□□□□□ -0.16
DEFA4P12838 AC063952.2-201ENST00000498792 1227 ntBASIC14.03□□□□□ -0.16
DEFA4P12838 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.03□□□□□ -0.16
DEFA4P12838 RN7SL850P-201ENST00000579959 291 ntBASIC14.03□□□□□ -0.16
DEFA4P12838 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.03□□□□□ -0.16
DEFA4P12838 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 Z83836.1-201ENST00000624605 1642 ntBASIC14.03□□□□□ -0.16
DEFA4P12838 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
DEFA4P12838 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
DEFA4P12838 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.03□□□□□ -0.16
DEFA4P12838 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
DEFA4P12838 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 DOC2GP-204ENST00000639052 2548 ntBASIC14.02□□□□□ -0.16
DEFA4P12838 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.02□□□□□ -0.16
DEFA4P12838 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
DEFA4P12838 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
DEFA4P12838 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
DEFA4P12838 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
DEFA4P12838 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.02□□□□□ -0.16
DEFA4P12838 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.02□□□□□ -0.16
DEFA4P12838 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
DEFA4P12838 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DEFA4P12838 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
DEFA4P12838 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DEFA4P12838 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DEFA4P12838 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DEFA4P12838 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.02□□□□□ -0.17
DEFA4P12838 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
DEFA4P12838 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.02□□□□□ -0.17
DEFA4P12838 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
DEFA4P12838 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.02□□□□□ -0.17
DEFA4P12838 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.02□□□□□ -0.17
DEFA4P12838 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.02□□□□□ -0.17
DEFA4P12838 VENTXP5-201ENST00000523979 775 ntBASIC14.02□□□□□ -0.17
DEFA4P12838 AC022616.7-201ENST00000525383 220 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms