Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 PCDHA14-201ENST00000506751 2298 ntBASIC15.12■□□□□ 0.01
UBCP0CG48 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
UBCP0CG48 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
UBCP0CG48 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 AL645929.1-201ENST00000420084 975 ntBASIC15.12■□□□□ 0.01
UBCP0CG48 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.12■□□□□ 0.01
UBCP0CG48 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.12■□□□□ 0.01
UBCP0CG48 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.12■□□□□ 0.01
UBCP0CG48 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 AC083849.1-201ENST00000615227 514 ntBASIC15.12■□□□□ 0.01
UBCP0CG48 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.12■□□□□ 0.01
UBCP0CG48 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.12■□□□□ 0.01
UBCP0CG48 FLJ38576-201ENST00000623820 2459 ntBASIC15.12■□□□□ 0.01
UBCP0CG48 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
UBCP0CG48 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.12■□□□□ 0.01
UBCP0CG48 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
UBCP0CG48 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
UBCP0CG48 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
UBCP0CG48 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
UBCP0CG48 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
UBCP0CG48 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBCP0CG48 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
UBCP0CG48 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
UBCP0CG48 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
UBCP0CG48 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 EGFEM1P-202ENST00000431685 1563 ntBASIC15.11■□□□□ 0.01
UBCP0CG48 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
UBCP0CG48 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.11■□□□□ 0.01
UBCP0CG48 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.11■□□□□ 0.01
UBCP0CG48 SPDYE13P-201ENST00000445314 798 ntBASIC15.11■□□□□ 0.01
UBCP0CG48 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.11■□□□□ 0.01
UBCP0CG48 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.11■□□□□ 0.01
UBCP0CG48 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.11■□□□□ 0.01
UBCP0CG48 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.11■□□□□ 0.01
UBCP0CG48 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.11■□□□□ 0.01
UBCP0CG48 LINC01238-205ENST00000567549 1107 ntBASIC15.11■□□□□ 0.01
UBCP0CG48 AC090616.6-201ENST00000582640 721 ntBASIC15.11■□□□□ 0.01
UBCP0CG48 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.11■□□□□ 0.01
UBCP0CG48 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.11■□□□□ 0.01
UBCP0CG48 AL138831.2-201ENST00000606564 490 ntBASIC15.11■□□□□ 0.01
UBCP0CG48 AL353801.3-201ENST00000609898 542 ntBASIC15.11■□□□□ 0.01
UBCP0CG48 AL592071.1-201ENST00000611956 408 ntBASIC15.11■□□□□ 0.01
UBCP0CG48 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
UBCP0CG48 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
UBCP0CG48 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.11■□□□□ 0.01
UBCP0CG48 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
UBCP0CG48 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
UBCP0CG48 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
UBCP0CG48 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
UBCP0CG48 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.11■□□□□ 0.01
UBCP0CG48 AL049757.1-201ENST00000616842 1596 ntBASIC15.11■□□□□ 0.01
UBCP0CG48 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBCP0CG48 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.11■□□□□ 0.01
UBCP0CG48 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
UBCP0CG48 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.1■□□□□ 0.01
UBCP0CG48 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.1■□□□□ 0.01
UBCP0CG48 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.1■□□□□ 0.01
UBCP0CG48 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBCP0CG48 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.1■□□□□ 0.01
UBCP0CG48 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.1■□□□□ 0.01
UBCP0CG48 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
UBCP0CG48 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms