Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CD3DP04234 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.62□□□□□ -0.07
CD3DP04234 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.62□□□□□ -0.07
CD3DP04234 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.62□□□□□ -0.07
CD3DP04234 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CD3DP04234 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CD3DP04234 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.62□□□□□ -0.07
CD3DP04234 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.62□□□□□ -0.07
CD3DP04234 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 AC090192.1-201ENST00000517740 490 ntBASIC14.62□□□□□ -0.07
CD3DP04234 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.62□□□□□ -0.07
CD3DP04234 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.62□□□□□ -0.07
CD3DP04234 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.62□□□□□ -0.07
CD3DP04234 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.62□□□□□ -0.07
CD3DP04234 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.62□□□□□ -0.07
CD3DP04234 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.62□□□□□ -0.07
CD3DP04234 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CD3DP04234 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.62□□□□□ -0.07
CD3DP04234 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.62□□□□□ -0.07
CD3DP04234 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.62□□□□□ -0.07
CD3DP04234 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.62□□□□□ -0.07
CD3DP04234 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.62□□□□□ -0.07
CD3DP04234 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CD3DP04234 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD3DP04234 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.62□□□□□ -0.07
CD3DP04234 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.62□□□□□ -0.07
CD3DP04234 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CD3DP04234 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD3DP04234 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD3DP04234 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD3DP04234 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CD3DP04234 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD3DP04234 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD3DP04234 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CD3DP04234 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD3DP04234 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD3DP04234 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.61□□□□□ -0.07
CD3DP04234 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.61□□□□□ -0.07
CD3DP04234 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD3DP04234 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CD3DP04234 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.61□□□□□ -0.07
CD3DP04234 RPS2P55-201ENST00000397318 883 ntBASIC14.61□□□□□ -0.07
CD3DP04234 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD3DP04234 AC107956.1-201ENST00000494359 873 ntBASIC14.61□□□□□ -0.07
CD3DP04234 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.61□□□□□ -0.07
CD3DP04234 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.61□□□□□ -0.07
CD3DP04234 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.61□□□□□ -0.07
CD3DP04234 AC026471.5-201ENST00000615068 467 ntBASIC14.61□□□□□ -0.07
CD3DP04234 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CD3DP04234 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CD3DP04234 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CD3DP04234 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CD3DP04234 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD3DP04234 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CD3DP04234 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD3DP04234 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.61□□□□□ -0.07
CD3DP04234 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD3DP04234 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD3DP04234 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD3DP04234 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD3DP04234 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.6□□□□□ -0.07
CD3DP04234 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD3DP04234 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD3DP04234 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CD3DP04234 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.6□□□□□ -0.07
CD3DP04234 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CD3DP04234 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CD3DP04234 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD3DP04234 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CD3DP04234 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CD3DP04234 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD3DP04234 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD3DP04234 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD3DP04234 UNC93B2-201ENST00000285383 730 ntBASIC14.6□□□□□ -0.07
CD3DP04234 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD3DP04234 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD3DP04234 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CD3DP04234 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CD3DP04234 TSPY12P-201ENST00000421279 868 ntBASIC14.6□□□□□ -0.07
CD3DP04234 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD3DP04234 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.6□□□□□ -0.07
CD3DP04234 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.6□□□□□ -0.07
CD3DP04234 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.6□□□□□ -0.07
CD3DP04234 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.6□□□□□ -0.07
CD3DP04234 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms