Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 LINC00896-202ENST00000609602 2128 ntBASIC19.85■□□□□ 0.77
COL2A1P02458 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
COL2A1P02458 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 UXT-AS1-201ENST00000590504 1525 ntBASIC19.85■□□□□ 0.77
COL2A1P02458 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.85■□□□□ 0.77
COL2A1P02458 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.85■□□□□ 0.77
COL2A1P02458 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.85■□□□□ 0.77
COL2A1P02458 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 AC108860.2-201ENST00000562760 2183 ntBASIC19.85■□□□□ 0.77
COL2A1P02458 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
COL2A1P02458 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.85■□□□□ 0.77
COL2A1P02458 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 SLC25A39P2-201ENST00000537614 270 ntBASIC19.85■□□□□ 0.77
COL2A1P02458 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.85■□□□□ 0.77
COL2A1P02458 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.85■□□□□ 0.77
COL2A1P02458 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.85■□□□□ 0.77
COL2A1P02458 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL2A1P02458 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL2A1P02458 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL2A1P02458 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.84■□□□□ 0.77
COL2A1P02458 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL2A1P02458 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL2A1P02458 TUBB8P12-201ENST00000308911 1335 ntBASIC19.84■□□□□ 0.77
COL2A1P02458 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL2A1P02458 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
COL2A1P02458 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL2A1P02458 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.84■□□□□ 0.77
COL2A1P02458 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
COL2A1P02458 TUBB7P-202ENST00000428444 1305 ntBASIC19.84■□□□□ 0.77
COL2A1P02458 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.84■□□□□ 0.77
COL2A1P02458 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.84■□□□□ 0.77
COL2A1P02458 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL2A1P02458 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.84■□□□□ 0.77
COL2A1P02458 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.84■□□□□ 0.77
COL2A1P02458 AC105233.2-201ENST00000523697 349 ntBASIC19.84■□□□□ 0.77
COL2A1P02458 AF228730.5-201ENST00000530288 346 ntBASIC19.84■□□□□ 0.77
COL2A1P02458 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.84■□□□□ 0.77
COL2A1P02458 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.84■□□□□ 0.77
COL2A1P02458 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.84■□□□□ 0.77
COL2A1P02458 TUBB8P7-204ENST00000567960 1332 ntBASIC19.84■□□□□ 0.77
COL2A1P02458 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.84■□□□□ 0.77
COL2A1P02458 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.84■□□□□ 0.77
COL2A1P02458 AC134043.2-201ENST00000624206 2238 ntBASIC19.84■□□□□ 0.77
COL2A1P02458 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL2A1P02458 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
COL2A1P02458 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL2A1P02458 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL2A1P02458 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL2A1P02458 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL2A1P02458 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
COL2A1P02458 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL2A1P02458 AC093214.1-201ENST00000511688 1107 ntBASIC19.83■□□□□ 0.76
COL2A1P02458 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.83■□□□□ 0.76
COL2A1P02458 AC013467.2-201ENST00000605472 835 ntBASIC19.83■□□□□ 0.76
COL2A1P02458 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL2A1P02458 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL2A1P02458 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
COL2A1P02458 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL2A1P02458 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
COL2A1P02458 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.83■□□□□ 0.76
COL2A1P02458 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL2A1P02458 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL2A1P02458 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.83■□□□□ 0.76
COL2A1P02458 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.83■□□□□ 0.76
COL2A1P02458 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL2A1P02458 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL2A1P02458 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL2A1P02458 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.82■□□□□ 0.76
COL2A1P02458 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL2A1P02458 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL2A1P02458 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL2A1P02458 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COL2A1P02458 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL2A1P02458 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.82■□□□□ 0.76
COL2A1P02458 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL2A1P02458 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.82■□□□□ 0.76
COL2A1P02458 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
COL2A1P02458 AC055876.3-201ENST00000431496 288 ntBASIC19.82■□□□□ 0.76
COL2A1P02458 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.82■□□□□ 0.76
COL2A1P02458 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.82■□□□□ 0.76
COL2A1P02458 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.82■□□□□ 0.76
COL2A1P02458 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.82■□□□□ 0.76
COL2A1P02458 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.82■□□□□ 0.76
COL2A1P02458 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.82■□□□□ 0.76
COL2A1P02458 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.82■□□□□ 0.76
COL2A1P02458 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.82■□□□□ 0.76
COL2A1P02458 AC138649.4-201ENST00000612222 287 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms