Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBC1P01850 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBC1P01850 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBC1P01850 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBC1P01850 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBC1P01850 IL9RP2-201ENST00000423948 1312 ntBASIC17.21■□□□□ 0.35
TRBC1P01850 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBC1P01850 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBC1P01850 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBC1P01850 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBC1P01850 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBC1P01850 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBC1P01850 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBC1P01850 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBC1P01850 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
TRBC1P01850 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBC1P01850 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBC1P01850 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBC1P01850 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBC1P01850 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBC1P01850 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBC1P01850 AL590627.1-203ENST00000421194 1026 ntBASIC17.21■□□□□ 0.35
TRBC1P01850 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRBC1P01850 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBC1P01850 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBC1P01850 IGHV3-65-201ENST00000523210 341 ntBASIC17.21■□□□□ 0.35
TRBC1P01850 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.21■□□□□ 0.35
TRBC1P01850 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBC1P01850 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBC1P01850 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBC1P01850 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBC1P01850 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBC1P01850 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.21■□□□□ 0.34
TRBC1P01850 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRBC1P01850 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRBC1P01850 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
TRBC1P01850 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRBC1P01850 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRBC1P01850 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.21■□□□□ 0.34
TRBC1P01850 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBC1P01850 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBC1P01850 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBC1P01850 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBC1P01850 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBC1P01850 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBC1P01850 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBC1P01850 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBC1P01850 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBC1P01850 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBC1P01850 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
TRBC1P01850 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBC1P01850 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBC1P01850 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBC1P01850 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.2■□□□□ 0.34
TRBC1P01850 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBC1P01850 PAWRP1-201ENST00000451083 565 ntBASIC17.2■□□□□ 0.34
TRBC1P01850 UNC93B6-202ENST00000528242 690 ntBASIC17.2■□□□□ 0.34
TRBC1P01850 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBC1P01850 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBC1P01850 PI4KAP1-204ENST00000612579 1703 ntBASIC17.2■□□□□ 0.34
TRBC1P01850 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBC1P01850 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBC1P01850 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBC1P01850 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
TRBC1P01850 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRBC1P01850 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBC1P01850 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBC1P01850 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBC1P01850 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRBC1P01850 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
TRBC1P01850 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBC1P01850 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.19■□□□□ 0.34
TRBC1P01850 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRBC1P01850 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBC1P01850 RNA5SP415-201ENST00000517246 115 ntBASIC17.19■□□□□ 0.34
TRBC1P01850 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBC1P01850 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBC1P01850 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
TRBC1P01850 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.19■□□□□ 0.34
TRBC1P01850 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBC1P01850 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.19■□□□□ 0.34
TRBC1P01850 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 AC120114.3-201ENST00000611923 658 ntBASIC17.19■□□□□ 0.34
TRBC1P01850 AF228730.7-201ENST00000641842 219 ntBASIC17.19■□□□□ 0.34
TRBC1P01850 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBC1P01850 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms