Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC073389.1-201ENST00000595595 795 ntBASIC19.41■□□□□ 0.7
ALDH1A1P00352 AC084346.2-201ENST00000607097 949 ntBASIC19.41■□□□□ 0.7
ALDH1A1P00352 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALDH1A1P00352 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALDH1A1P00352 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALDH1A1P00352 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALDH1A1P00352 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 HCG11-201ENST00000411553 5696 ntBASIC19.41■□□□□ 0.7
ALDH1A1P00352 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALDH1A1P00352 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALDH1A1P00352 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ALDH1A1P00352 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALDH1A1P00352 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.4■□□□□ 0.7
ALDH1A1P00352 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.4■□□□□ 0.7
ALDH1A1P00352 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ALDH1A1P00352 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALDH1A1P00352 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALDH1A1P00352 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.4■□□□□ 0.7
ALDH1A1P00352 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALDH1A1P00352 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ALDH1A1P00352 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.4■□□□□ 0.7
ALDH1A1P00352 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.4■□□□□ 0.7
ALDH1A1P00352 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.4■□□□□ 0.7
ALDH1A1P00352 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.4■□□□□ 0.7
ALDH1A1P00352 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.4■□□□□ 0.7
ALDH1A1P00352 AL844908.2-201ENST00000609461 460 ntBASIC19.4■□□□□ 0.7
ALDH1A1P00352 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.4■□□□□ 0.7
ALDH1A1P00352 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.4■□□□□ 0.7
ALDH1A1P00352 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALDH1A1P00352 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ALDH1A1P00352 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.4■□□□□ 0.7
ALDH1A1P00352 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALDH1A1P00352 RNF165-205ENST00000588679 2904 ntBASIC19.4■□□□□ 0.7
ALDH1A1P00352 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ALDH1A1P00352 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ALDH1A1P00352 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ALDH1A1P00352 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ALDH1A1P00352 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ALDH1A1P00352 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.39■□□□□ 0.7
ALDH1A1P00352 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ALDH1A1P00352 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.39■□□□□ 0.69
ALDH1A1P00352 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ALDH1A1P00352 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ALDH1A1P00352 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ALDH1A1P00352 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ALDH1A1P00352 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
ALDH1A1P00352 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALDH1A1P00352 AC112492.5-201ENST00000421897 457 ntBASIC19.39■□□□□ 0.69
ALDH1A1P00352 AC092658.1-201ENST00000505836 891 ntBASIC19.39■□□□□ 0.69
ALDH1A1P00352 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.39■□□□□ 0.69
ALDH1A1P00352 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.39■□□□□ 0.69
ALDH1A1P00352 AC132938.2-201ENST00000579188 680 ntBASIC19.39■□□□□ 0.69
ALDH1A1P00352 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALDH1A1P00352 AL591163.1-201ENST00000641757 987 ntBASIC19.39■□□□□ 0.69
ALDH1A1P00352 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ALDH1A1P00352 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.39■□□□□ 0.69
ALDH1A1P00352 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALDH1A1P00352 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ALDH1A1P00352 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.39■□□□□ 0.69
ALDH1A1P00352 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.39■□□□□ 0.69
ALDH1A1P00352 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ALDH1A1P00352 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALDH1A1P00352 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.39■□□□□ 0.69
ALDH1A1P00352 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ALDH1A1P00352 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ALDH1A1P00352 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ALDH1A1P00352 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ALDH1A1P00352 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
ALDH1A1P00352 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
ALDH1A1P00352 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ALDH1A1P00352 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ALDH1A1P00352 HLA-H-201ENST00000383620 1096 ntBASIC19.38■□□□□ 0.69
ALDH1A1P00352 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
ALDH1A1P00352 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ALDH1A1P00352 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.38■□□□□ 0.69
ALDH1A1P00352 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.38■□□□□ 0.69
ALDH1A1P00352 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.38■□□□□ 0.69
ALDH1A1P00352 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.38■□□□□ 0.69
ALDH1A1P00352 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ALDH1A1P00352 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ALDH1A1P00352 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.38■□□□□ 0.69
ALDH1A1P00352 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.38■□□□□ 0.69
ALDH1A1P00352 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ALDH1A1P00352 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ALDH1A1P00352 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ALDH1A1P00352 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.38■□□□□ 0.69
ALDH1A1P00352 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ALDH1A1P00352 AP000997.3-201ENST00000623333 2250 ntBASIC19.38■□□□□ 0.69
ALDH1A1P00352 LINC01451-201ENST00000623792 534 ntBASIC19.38■□□□□ 0.69
ALDH1A1P00352 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ALDH1A1P00352 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ALDH1A1P00352 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ALDH1A1P00352 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ALDH1A1P00352 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALDH1A1P00352 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALDH1A1P00352 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.37■□□□□ 0.69
ALDH1A1P00352 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms