Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
MBD3O95983 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.74■□□□□ 0.75
MBD3O95983 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.74■□□□□ 0.75
MBD3O95983 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.74■□□□□ 0.75
MBD3O95983 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3O95983 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
MBD3O95983 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3O95983 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
MBD3O95983 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3O95983 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3O95983 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
MBD3O95983 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
MBD3O95983 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3O95983 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MBD3O95983 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.73■□□□□ 0.75
MBD3O95983 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
MBD3O95983 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3O95983 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.73■□□□□ 0.75
MBD3O95983 PRORSD1P-201ENST00000295112 541 ntBASIC19.73■□□□□ 0.75
MBD3O95983 ECEL1P2-202ENST00000465689 757 ntBASIC19.73■□□□□ 0.75
MBD3O95983 GCSHP2-201ENST00000560971 527 ntBASIC19.73■□□□□ 0.75
MBD3O95983 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.73■□□□□ 0.75
MBD3O95983 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3O95983 Z99916.2-201ENST00000604037 246 ntBASIC19.73■□□□□ 0.75
MBD3O95983 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3O95983 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
MBD3O95983 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3O95983 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3O95983 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3O95983 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
MBD3O95983 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3O95983 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3O95983 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3O95983 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3O95983 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.73■□□□□ 0.75
MBD3O95983 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3O95983 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3O95983 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
MBD3O95983 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
MBD3O95983 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 IGHGP-201ENST00000390555 1178 ntBASIC19.72■□□□□ 0.75
MBD3O95983 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.72■□□□□ 0.75
MBD3O95983 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.72■□□□□ 0.75
MBD3O95983 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.72■□□□□ 0.75
MBD3O95983 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.72■□□□□ 0.75
MBD3O95983 GCSHP5-201ENST00000443090 522 ntBASIC19.72■□□□□ 0.75
MBD3O95983 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.72■□□□□ 0.75
MBD3O95983 RASA4DP-201ENST00000460726 1199 ntBASIC19.72■□□□□ 0.75
MBD3O95983 AC098590.1-201ENST00000468126 897 ntBASIC19.72■□□□□ 0.75
MBD3O95983 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.72■□□□□ 0.75
MBD3O95983 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
MBD3O95983 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.72■□□□□ 0.75
MBD3O95983 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
MBD3O95983 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
MBD3O95983 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3O95983 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
MBD3O95983 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3O95983 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3O95983 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.71■□□□□ 0.75
MBD3O95983 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3O95983 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
MBD3O95983 AC024909.3-201ENST00000611513 2257 ntBASIC19.71■□□□□ 0.75
MBD3O95983 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3O95983 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
MBD3O95983 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3O95983 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
MBD3O95983 AL645728.1-201ENST00000366221 2101 ntBASIC19.71■□□□□ 0.75
MBD3O95983 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.71■□□□□ 0.75
MBD3O95983 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3O95983 AL158047.1-201ENST00000445918 881 ntBASIC19.71■□□□□ 0.75
MBD3O95983 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3O95983 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms