Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PRAMEF4O60810 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF4O60810 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.52■□□□□ 0.24
PRAMEF4O60810 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.52■□□□□ 0.24
PRAMEF4O60810 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF4O60810 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PRAMEF4O60810 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
PRAMEF4O60810 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.52■□□□□ 0.24
PRAMEF4O60810 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF4O60810 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF4O60810 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF4O60810 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF4O60810 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.52■□□□□ 0.24
PRAMEF4O60810 AP002414.1-201ENST00000391405 1147 ntBASIC16.52■□□□□ 0.24
PRAMEF4O60810 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.52■□□□□ 0.24
PRAMEF4O60810 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.52■□□□□ 0.24
PRAMEF4O60810 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.52■□□□□ 0.24
PRAMEF4O60810 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
PRAMEF4O60810 MTDHP4-201ENST00000600287 670 ntBASIC16.52■□□□□ 0.24
PRAMEF4O60810 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.52■□□□□ 0.24
PRAMEF4O60810 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.52■□□□□ 0.24
PRAMEF4O60810 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
PRAMEF4O60810 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF4O60810 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.52■□□□□ 0.23
PRAMEF4O60810 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF4O60810 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF4O60810 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.52■□□□□ 0.23
PRAMEF4O60810 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF4O60810 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF4O60810 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF4O60810 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF4O60810 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF4O60810 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF4O60810 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 AC092171.3-201ENST00000610122 2651 ntBASIC16.51■□□□□ 0.23
PRAMEF4O60810 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF4O60810 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF4O60810 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF4O60810 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF4O60810 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 EMBP1-201ENST00000458200 901 ntBASIC16.51■□□□□ 0.23
PRAMEF4O60810 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF4O60810 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF4O60810 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF4O60810 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
PRAMEF4O60810 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PRAMEF4O60810 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PRAMEF4O60810 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PRAMEF4O60810 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.5■□□□□ 0.23
PRAMEF4O60810 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEF4O60810 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.5■□□□□ 0.23
PRAMEF4O60810 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 AL139424.1-201ENST00000607572 797 ntBASIC16.5■□□□□ 0.23
PRAMEF4O60810 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEF4O60810 TP73-AS1-207ENST00000624167 988 ntBASIC16.5■□□□□ 0.23
PRAMEF4O60810 NCF1C-201ENST00000438382 1427 ntBASIC16.5■□□□□ 0.23
PRAMEF4O60810 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEF4O60810 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PRAMEF4O60810 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.5■□□□□ 0.23
PRAMEF4O60810 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PRAMEF4O60810 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PRAMEF4O60810 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF4O60810 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF4O60810 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms