Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC012640.2-201ENST00000561606 901 ntBASIC21.2■□□□□ 0.98
SMARCA5O60264 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SMARCA5O60264 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.2■□□□□ 0.98
SMARCA5O60264 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCA5O60264 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCA5O60264 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.2■□□□□ 0.98
SMARCA5O60264 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCA5O60264 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.2■□□□□ 0.98
SMARCA5O60264 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCA5O60264 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCA5O60264 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCA5O60264 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SMARCA5O60264 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC21.2■□□□□ 0.98
SMARCA5O60264 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
SMARCA5O60264 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCA5O60264 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCA5O60264 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
SMARCA5O60264 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMARCA5O60264 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SMARCA5O60264 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCA5O60264 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCA5O60264 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCA5O60264 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SMARCA5O60264 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCA5O60264 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCA5O60264 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCA5O60264 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SMARCA5O60264 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCA5O60264 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.19■□□□□ 0.98
SMARCA5O60264 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.19■□□□□ 0.98
SMARCA5O60264 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.19■□□□□ 0.98
SMARCA5O60264 AC004706.3-202ENST00000621574 984 ntBASIC21.19■□□□□ 0.98
SMARCA5O60264 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.19■□□□□ 0.98
SMARCA5O60264 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
SMARCA5O60264 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.19■□□□□ 0.98
SMARCA5O60264 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCA5O60264 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCA5O60264 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
SMARCA5O60264 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCA5O60264 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
SMARCA5O60264 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMARCA5O60264 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SMARCA5O60264 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCA5O60264 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SMARCA5O60264 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCA5O60264 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCA5O60264 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCA5O60264 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCA5O60264 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.18■□□□□ 0.98
SMARCA5O60264 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.18■□□□□ 0.98
SMARCA5O60264 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCA5O60264 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCA5O60264 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCA5O60264 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.18■□□□□ 0.98
SMARCA5O60264 ELK2BP-201ENST00000415014 1224 ntBASIC21.18■□□□□ 0.98
SMARCA5O60264 AGGF1P2-201ENST00000426656 2106 ntBASIC21.18■□□□□ 0.98
SMARCA5O60264 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCA5O60264 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.18■□□□□ 0.98
SMARCA5O60264 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.18■□□□□ 0.98
SMARCA5O60264 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.18■□□□□ 0.98
SMARCA5O60264 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.18■□□□□ 0.98
SMARCA5O60264 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.18■□□□□ 0.98
SMARCA5O60264 AC139887.3-201ENST00000568585 713 ntBASIC21.18■□□□□ 0.98
SMARCA5O60264 AL049840.3-201ENST00000602669 611 ntBASIC21.18■□□□□ 0.98
SMARCA5O60264 AL139424.1-201ENST00000607572 797 ntBASIC21.18■□□□□ 0.98
SMARCA5O60264 AL589182.2-201ENST00000619332 1049 ntBASIC21.18■□□□□ 0.98
SMARCA5O60264 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCA5O60264 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.18■□□□□ 0.98
SMARCA5O60264 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCA5O60264 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCA5O60264 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SMARCA5O60264 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.18■□□□□ 0.98
SMARCA5O60264 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCA5O60264 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SMARCA5O60264 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCA5O60264 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCA5O60264 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMARCA5O60264 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCA5O60264 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCA5O60264 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCA5O60264 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCA5O60264 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCA5O60264 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.17■□□□□ 0.98
SMARCA5O60264 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCA5O60264 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC21.17■□□□□ 0.98
SMARCA5O60264 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SMARCA5O60264 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCA5O60264 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SMARCA5O60264 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCA5O60264 MRPL3P1-201ENST00000400109 1033 ntBASIC21.17■□□□□ 0.98
SMARCA5O60264 AC018712.1-201ENST00000455767 687 ntBASIC21.17■□□□□ 0.98
SMARCA5O60264 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMARCA5O60264 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.17■□□□□ 0.98
SMARCA5O60264 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.17■□□□□ 0.98
SMARCA5O60264 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
SMARCA5O60264 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.17■□□□□ 0.98
SMARCA5O60264 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SMARCA5O60264 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.17■□□□□ 0.98
SMARCA5O60264 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SMARCA5O60264 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms