Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IDH3BO43837 AL353692.3-201ENST00000407031 1396 ntBASIC15.87■□□□□ 0.13
IDH3BO43837 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IDH3BO43837 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.86■□□□□ 0.13
IDH3BO43837 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 AC068587.6-202ENST00000641839 5619 ntBASIC15.86■□□□□ 0.13
IDH3BO43837 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.86■□□□□ 0.13
IDH3BO43837 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
IDH3BO43837 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 AC096633.1-201ENST00000422446 749 ntBASIC15.86■□□□□ 0.13
IDH3BO43837 MTCL1P1-201ENST00000446207 792 ntBASIC15.86■□□□□ 0.13
IDH3BO43837 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.86■□□□□ 0.13
IDH3BO43837 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.86■□□□□ 0.13
IDH3BO43837 AC093827.2-201ENST00000512654 315 ntBASIC15.86■□□□□ 0.13
IDH3BO43837 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.86■□□□□ 0.13
IDH3BO43837 AC010203.1-204ENST00000548782 407 ntBASIC15.86■□□□□ 0.13
IDH3BO43837 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
IDH3BO43837 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.86■□□□□ 0.13
IDH3BO43837 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 AC097374.2-201ENST00000618617 1306 ntBASIC15.86■□□□□ 0.13
IDH3BO43837 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
IDH3BO43837 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.86■□□□□ 0.13
IDH3BO43837 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IDH3BO43837 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.85■□□□□ 0.13
IDH3BO43837 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.85■□□□□ 0.13
IDH3BO43837 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.85■□□□□ 0.13
IDH3BO43837 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
IDH3BO43837 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.85■□□□□ 0.13
IDH3BO43837 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 SPDYE15P-201ENST00000424157 909 ntBASIC15.85■□□□□ 0.13
IDH3BO43837 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.85■□□□□ 0.13
IDH3BO43837 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.85■□□□□ 0.13
IDH3BO43837 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.85■□□□□ 0.13
IDH3BO43837 GPR32P1-201ENST00000601788 811 ntBASIC15.85■□□□□ 0.13
IDH3BO43837 AC005363.2-201ENST00000618631 242 ntBASIC15.85■□□□□ 0.13
IDH3BO43837 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.85■□□□□ 0.13
IDH3BO43837 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.85■□□□□ 0.13
IDH3BO43837 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
IDH3BO43837 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 LINC01311-201ENST00000565162 1445 ntBASIC15.85■□□□□ 0.13
IDH3BO43837 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IDH3BO43837 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IDH3BO43837 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IDH3BO43837 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
IDH3BO43837 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
IDH3BO43837 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
IDH3BO43837 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
IDH3BO43837 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IDH3BO43837 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IDH3BO43837 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IDH3BO43837 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.84■□□□□ 0.13
IDH3BO43837 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IDH3BO43837 AC113347.1-201ENST00000413321 391 ntBASIC15.84■□□□□ 0.13
IDH3BO43837 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.84■□□□□ 0.13
IDH3BO43837 HOMER2P1-201ENST00000455653 964 ntBASIC15.84■□□□□ 0.13
IDH3BO43837 AC068472.1-201ENST00000474589 881 ntBASIC15.84■□□□□ 0.13
IDH3BO43837 YBX1P2-201ENST00000489612 999 ntBASIC15.84■□□□□ 0.13
IDH3BO43837 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IDH3BO43837 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IDH3BO43837 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.84■□□□□ 0.13
IDH3BO43837 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.84■□□□□ 0.13
IDH3BO43837 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms