Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACTN4O43707 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACTN4O43707 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACTN4O43707 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.29■□□□□ 0.68
ACTN4O43707 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.29■□□□□ 0.68
ACTN4O43707 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.29■□□□□ 0.68
ACTN4O43707 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.29■□□□□ 0.68
ACTN4O43707 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACTN4O43707 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ACTN4O43707 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ACTN4O43707 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ACTN4O43707 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ACTN4O43707 PCDHB17P-201ENST00000539533 2393 ntBASIC19.28■□□□□ 0.68
ACTN4O43707 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.28■□□□□ 0.68
ACTN4O43707 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.28■□□□□ 0.68
ACTN4O43707 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACTN4O43707 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACTN4O43707 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ACTN4O43707 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACTN4O43707 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.28■□□□□ 0.68
ACTN4O43707 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.28■□□□□ 0.68
ACTN4O43707 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACTN4O43707 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.28■□□□□ 0.68
ACTN4O43707 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.28■□□□□ 0.68
ACTN4O43707 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.28■□□□□ 0.68
ACTN4O43707 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ACTN4O43707 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ACTN4O43707 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.28■□□□□ 0.68
ACTN4O43707 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.28■□□□□ 0.68
ACTN4O43707 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACTN4O43707 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACTN4O43707 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACTN4O43707 PCDHB19P-201ENST00000570871 2371 ntBASIC19.28■□□□□ 0.68
ACTN4O43707 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACTN4O43707 AC079776.2-201ENST00000641154 1609 ntBASIC19.28■□□□□ 0.68
ACTN4O43707 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACTN4O43707 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ACTN4O43707 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACTN4O43707 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACTN4O43707 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ACTN4O43707 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ACTN4O43707 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ACTN4O43707 TNRC18P3-201ENST00000441896 2691 ntBASIC19.28■□□□□ 0.68
ACTN4O43707 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACTN4O43707 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.27■□□□□ 0.68
ACTN4O43707 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACTN4O43707 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACTN4O43707 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ACTN4O43707 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ACTN4O43707 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
ACTN4O43707 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.27■□□□□ 0.68
ACTN4O43707 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ACTN4O43707 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACTN4O43707 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.27■□□□□ 0.68
ACTN4O43707 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACTN4O43707 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACTN4O43707 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACTN4O43707 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.27■□□□□ 0.68
ACTN4O43707 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.27■□□□□ 0.68
ACTN4O43707 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACTN4O43707 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ACTN4O43707 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ACTN4O43707 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACTN4O43707 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ACTN4O43707 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
ACTN4O43707 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.27■□□□□ 0.68
ACTN4O43707 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ACTN4O43707 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.27■□□□□ 0.67
ACTN4O43707 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ACTN4O43707 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.27■□□□□ 0.67
ACTN4O43707 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ACTN4O43707 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ACTN4O43707 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ACTN4O43707 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.26■□□□□ 0.67
ACTN4O43707 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACTN4O43707 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ACTN4O43707 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.26■□□□□ 0.67
ACTN4O43707 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ACTN4O43707 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.26■□□□□ 0.67
ACTN4O43707 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ACTN4O43707 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ACTN4O43707 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ACTN4O43707 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ACTN4O43707 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.26■□□□□ 0.67
ACTN4O43707 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.26■□□□□ 0.67
ACTN4O43707 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ACTN4O43707 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ACTN4O43707 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ACTN4O43707 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.26■□□□□ 0.67
ACTN4O43707 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ACTN4O43707 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.26■□□□□ 0.67
ACTN4O43707 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
ACTN4O43707 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.26■□□□□ 0.67
ACTN4O43707 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.26■□□□□ 0.67
ACTN4O43707 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.26■□□□□ 0.67
ACTN4O43707 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.26■□□□□ 0.67
ACTN4O43707 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.26■□□□□ 0.67
ACTN4O43707 AP001269.4-201ENST00000609611 512 ntBASIC19.26■□□□□ 0.67
ACTN4O43707 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ACTN4O43707 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms