Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXS1O43638 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 RHOQP3-201ENST00000437982 621 ntBASIC16.12■□□□□ 0.17
FOXS1O43638 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXS1O43638 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 CXCL1P1-201ENST00000502804 216 ntBASIC16.12■□□□□ 0.17
FOXS1O43638 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.12■□□□□ 0.17
FOXS1O43638 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXS1O43638 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXS1O43638 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXS1O43638 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.12■□□□□ 0.17
FOXS1O43638 ACTL9-202ENST00000612068 1252 ntBASIC16.12■□□□□ 0.17
FOXS1O43638 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXS1O43638 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXS1O43638 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 AC129492.6-201ENST00000611383 1305 ntBASIC16.12■□□□□ 0.17
FOXS1O43638 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXS1O43638 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXS1O43638 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
FOXS1O43638 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
FOXS1O43638 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXS1O43638 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXS1O43638 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FOXS1O43638 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FOXS1O43638 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXS1O43638 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXS1O43638 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
FOXS1O43638 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXS1O43638 AC023274.1-201ENST00000418278 595 ntBASIC16.11■□□□□ 0.17
FOXS1O43638 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.11■□□□□ 0.17
FOXS1O43638 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXS1O43638 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.11■□□□□ 0.17
FOXS1O43638 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXS1O43638 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXS1O43638 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.11■□□□□ 0.17
FOXS1O43638 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.11■□□□□ 0.17
FOXS1O43638 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.11■□□□□ 0.17
FOXS1O43638 AC040169.1-201ENST00000565382 521 ntBASIC16.11■□□□□ 0.17
FOXS1O43638 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXS1O43638 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXS1O43638 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXS1O43638 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FOXS1O43638 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXS1O43638 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FOXS1O43638 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FOXS1O43638 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXS1O43638 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXS1O43638 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FOXS1O43638 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXS1O43638 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXS1O43638 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
FOXS1O43638 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXS1O43638 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXS1O43638 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXS1O43638 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
FOXS1O43638 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXS1O43638 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
FOXS1O43638 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXS1O43638 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.1■□□□□ 0.17
FOXS1O43638 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXS1O43638 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXS1O43638 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXS1O43638 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
FOXS1O43638 AC124947.2-201ENST00000547118 1133 ntBASIC16.1■□□□□ 0.17
FOXS1O43638 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXS1O43638 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXS1O43638 AC023511.2-201ENST00000618803 211 ntBASIC16.1■□□□□ 0.17
FOXS1O43638 AC092865.6-201ENST00000642101 219 ntBASIC16.1■□□□□ 0.17
FOXS1O43638 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXS1O43638 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXS1O43638 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXS1O43638 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms