Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2A1O14983 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ATP2A1O14983 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ATP2A1O14983 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ATP2A1O14983 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
ATP2A1O14983 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ATP2A1O14983 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2A1O14983 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
ATP2A1O14983 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2A1O14983 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP2A1O14983 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2A1O14983 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2A1O14983 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2A1O14983 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2A1O14983 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2A1O14983 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2A1O14983 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.61■□□□□ 0.73
ATP2A1O14983 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP2A1O14983 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ATP2A1O14983 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
ATP2A1O14983 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.61■□□□□ 0.73
ATP2A1O14983 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.61■□□□□ 0.73
ATP2A1O14983 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ATP2A1O14983 MIR4515-201ENST00000584082 81 ntBASIC19.61■□□□□ 0.73
ATP2A1O14983 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.61■□□□□ 0.73
ATP2A1O14983 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
ATP2A1O14983 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP2A1O14983 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.61■□□□□ 0.73
ATP2A1O14983 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2A1O14983 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2A1O14983 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2A1O14983 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2A1O14983 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2A1O14983 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP2A1O14983 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2A1O14983 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2A1O14983 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP2A1O14983 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP2A1O14983 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.6■□□□□ 0.73
ATP2A1O14983 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
ATP2A1O14983 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2A1O14983 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2A1O14983 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP2A1O14983 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2A1O14983 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2A1O14983 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.6■□□□□ 0.73
ATP2A1O14983 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.6■□□□□ 0.73
ATP2A1O14983 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.6■□□□□ 0.73
ATP2A1O14983 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.6■□□□□ 0.73
ATP2A1O14983 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2A1O14983 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2A1O14983 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2A1O14983 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP2A1O14983 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
ATP2A1O14983 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.6■□□□□ 0.73
ATP2A1O14983 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.59■□□□□ 0.73
ATP2A1O14983 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2A1O14983 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2A1O14983 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2A1O14983 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2A1O14983 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2A1O14983 AL139400.1-201ENST00000366220 510 ntBASIC19.59■□□□□ 0.73
ATP2A1O14983 TSEN15P1-201ENST00000423257 515 ntBASIC19.59■□□□□ 0.73
ATP2A1O14983 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.59■□□□□ 0.73
ATP2A1O14983 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
ATP2A1O14983 HLA-J-203ENST00000494367 1087 ntBASIC19.59■□□□□ 0.73
ATP2A1O14983 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.59■□□□□ 0.73
ATP2A1O14983 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP2A1O14983 AC005412.3-201ENST00000580309 715 ntBASIC19.59■□□□□ 0.73
ATP2A1O14983 AC099522.2-201ENST00000607001 744 ntBASIC19.59■□□□□ 0.73
ATP2A1O14983 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.59■□□□□ 0.73
ATP2A1O14983 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2A1O14983 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2A1O14983 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP2A1O14983 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ATP2A1O14983 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.59■□□□□ 0.73
ATP2A1O14983 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP2A1O14983 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2A1O14983 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
ATP2A1O14983 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
ATP2A1O14983 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.59■□□□□ 0.73
ATP2A1O14983 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2A1O14983 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2A1O14983 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
ATP2A1O14983 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2A1O14983 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.58■□□□□ 0.73
ATP2A1O14983 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.58■□□□□ 0.73
ATP2A1O14983 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.58■□□□□ 0.73
ATP2A1O14983 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.58■□□□□ 0.73
ATP2A1O14983 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2A1O14983 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2A1O14983 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2A1O14983 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2A1O14983 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2A1O14983 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2A1O14983 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2A1O14983 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.58■□□□□ 0.72
ATP2A1O14983 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP2A1O14983 AL355306.1-201ENST00000415580 579 ntBASIC19.58■□□□□ 0.72
ATP2A1O14983 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms