Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
E2F3O00716 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.79■□□□□ 0.28
E2F3O00716 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
E2F3O00716 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
E2F3O00716 AC114341.1-201ENST00000618070 349 ntBASIC16.79■□□□□ 0.28
E2F3O00716 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.79■□□□□ 0.28
E2F3O00716 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.79■□□□□ 0.28
E2F3O00716 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.79■□□□□ 0.28
E2F3O00716 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.79■□□□□ 0.28
E2F3O00716 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.79■□□□□ 0.28
E2F3O00716 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
E2F3O00716 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
E2F3O00716 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
E2F3O00716 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
E2F3O00716 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.79■□□□□ 0.28
E2F3O00716 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.78■□□□□ 0.28
E2F3O00716 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.78■□□□□ 0.28
E2F3O00716 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
E2F3O00716 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
E2F3O00716 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
E2F3O00716 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
E2F3O00716 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
E2F3O00716 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
E2F3O00716 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
E2F3O00716 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
E2F3O00716 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
E2F3O00716 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.78■□□□□ 0.28
E2F3O00716 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.78■□□□□ 0.28
E2F3O00716 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.78■□□□□ 0.28
E2F3O00716 AC074051.2-201ENST00000565115 352 ntBASIC16.78■□□□□ 0.28
E2F3O00716 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.78■□□□□ 0.28
E2F3O00716 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.78■□□□□ 0.28
E2F3O00716 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.78■□□□□ 0.28
E2F3O00716 AP000867.4-201ENST00000641616 219 ntBASIC16.78■□□□□ 0.28
E2F3O00716 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.78■□□□□ 0.28
E2F3O00716 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 RNF216P1-203ENST00000404404 2427 ntBASIC16.78■□□□□ 0.28
E2F3O00716 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
E2F3O00716 AC148477.5-201ENST00000625164 1645 ntBASIC16.78■□□□□ 0.28
E2F3O00716 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
E2F3O00716 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
E2F3O00716 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
E2F3O00716 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
E2F3O00716 FRMD8P1-201ENST00000440433 1524 ntBASIC16.77■□□□□ 0.28
E2F3O00716 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
E2F3O00716 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
E2F3O00716 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
E2F3O00716 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.77■□□□□ 0.28
E2F3O00716 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.77■□□□□ 0.28
E2F3O00716 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.77■□□□□ 0.28
E2F3O00716 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
E2F3O00716 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.77■□□□□ 0.28
E2F3O00716 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.77■□□□□ 0.28
E2F3O00716 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
E2F3O00716 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
E2F3O00716 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
E2F3O00716 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
E2F3O00716 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
E2F3O00716 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
E2F3O00716 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
E2F3O00716 OR6D1P-202ENST00000641007 5290 ntBASIC16.77■□□□□ 0.27
E2F3O00716 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
E2F3O00716 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
E2F3O00716 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
E2F3O00716 AC078925.2-201ENST00000624013 1973 ntBASIC16.77■□□□□ 0.27
E2F3O00716 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
E2F3O00716 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
E2F3O00716 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
E2F3O00716 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
E2F3O00716 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
E2F3O00716 PCDHA14-201ENST00000506751 2298 ntBASIC16.76■□□□□ 0.27
E2F3O00716 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
E2F3O00716 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
E2F3O00716 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.76■□□□□ 0.27
E2F3O00716 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
E2F3O00716 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
E2F3O00716 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
E2F3O00716 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
E2F3O00716 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
E2F3O00716 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
E2F3O00716 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
E2F3O00716 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
E2F3O00716 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms