Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.03■□□□□ 0.32
TLR4O00206 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TLR4O00206 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.03■□□□□ 0.32
TLR4O00206 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.03■□□□□ 0.32
TLR4O00206 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR4O00206 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR4O00206 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR4O00206 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR4O00206 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR4O00206 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR4O00206 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.03■□□□□ 0.32
TLR4O00206 PKD1P1-201ENST00000458669 6805 ntBASIC17.03■□□□□ 0.32
TLR4O00206 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TLR4O00206 AC046185.3-201ENST00000623228 1824 ntBASIC17.03■□□□□ 0.32
TLR4O00206 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TLR4O00206 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.02■□□□□ 0.32
TLR4O00206 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TLR4O00206 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TLR4O00206 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
TLR4O00206 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TLR4O00206 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TLR4O00206 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TLR4O00206 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.02■□□□□ 0.32
TLR4O00206 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TLR4O00206 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TLR4O00206 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TLR4O00206 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
TLR4O00206 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.02■□□□□ 0.32
TLR4O00206 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TLR4O00206 AL135999.2-201ENST00000622438 1686 ntBASIC17.02■□□□□ 0.32
TLR4O00206 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TLR4O00206 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TLR4O00206 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.02■□□□□ 0.32
TLR4O00206 FAM58CP-201ENST00000435741 640 ntBASIC17.02■□□□□ 0.32
TLR4O00206 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.02■□□□□ 0.32
TLR4O00206 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
TLR4O00206 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.02■□□□□ 0.32
TLR4O00206 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.02■□□□□ 0.32
TLR4O00206 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TLR4O00206 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TLR4O00206 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.02■□□□□ 0.31
TLR4O00206 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TLR4O00206 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TLR4O00206 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TLR4O00206 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TLR4O00206 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TLR4O00206 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TLR4O00206 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TLR4O00206 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TLR4O00206 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TLR4O00206 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.01■□□□□ 0.31
TLR4O00206 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 GNAS-203ENST00000306120 1878 ntBASIC17.01■□□□□ 0.31
TLR4O00206 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
TLR4O00206 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.01■□□□□ 0.31
TLR4O00206 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.01■□□□□ 0.31
TLR4O00206 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.01■□□□□ 0.31
TLR4O00206 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.01■□□□□ 0.31
TLR4O00206 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.01■□□□□ 0.31
TLR4O00206 AP002472.1-201ENST00000577490 586 ntBASIC17.01■□□□□ 0.31
TLR4O00206 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.01■□□□□ 0.31
TLR4O00206 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.01■□□□□ 0.31
TLR4O00206 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.01■□□□□ 0.31
TLR4O00206 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TLR4O00206 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TLR4O00206 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.01■□□□□ 0.31
TLR4O00206 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TLR4O00206 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TLR4O00206 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.01■□□□□ 0.31
TLR4O00206 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR4O00206 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TLR4O00206 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TLR4O00206 AC138028.4-201ENST00000564984 1845 ntBASIC17■□□□□ 0.31
TLR4O00206 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TLR4O00206 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17■□□□□ 0.31
TLR4O00206 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TLR4O00206 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TLR4O00206 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
TLR4O00206 AC134043.2-201ENST00000624206 2238 ntBASIC17■□□□□ 0.31
TLR4O00206 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TLR4O00206 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17■□□□□ 0.31
TLR4O00206 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms