Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
COLCA2A8K830 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.18□□□□□ -0.3
COLCA2A8K830 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.18□□□□□ -0.3
COLCA2A8K830 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
COLCA2A8K830 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.18□□□□□ -0.3
COLCA2A8K830 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.18□□□□□ -0.3
COLCA2A8K830 AL390719.1-204ENST00000412397 1219 ntBASIC13.18□□□□□ -0.3
COLCA2A8K830 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC13.18□□□□□ -0.3
COLCA2A8K830 DDX43P3-201ENST00000441064 443 ntBASIC13.18□□□□□ -0.3
COLCA2A8K830 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.18□□□□□ -0.3
COLCA2A8K830 MIR4466-201ENST00000606121 54 ntBASIC13.18□□□□□ -0.3
COLCA2A8K830 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
COLCA2A8K830 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.18□□□□□ -0.3
COLCA2A8K830 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
COLCA2A8K830 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
COLCA2A8K830 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
COLCA2A8K830 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
COLCA2A8K830 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
COLCA2A8K830 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
COLCA2A8K830 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
COLCA2A8K830 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.17□□□□□ -0.3
COLCA2A8K830 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
COLCA2A8K830 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.17□□□□□ -0.3
COLCA2A8K830 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
COLCA2A8K830 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.17□□□□□ -0.3
COLCA2A8K830 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.17□□□□□ -0.3
COLCA2A8K830 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
COLCA2A8K830 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.17□□□□□ -0.3
COLCA2A8K830 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 AL390755.1-201ENST00000623716 2027 ntBASIC13.17□□□□□ -0.3
COLCA2A8K830 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.17□□□□□ -0.3
COLCA2A8K830 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.17□□□□□ -0.3
COLCA2A8K830 RPS2P52-201ENST00000469610 820 ntBASIC13.17□□□□□ -0.3
COLCA2A8K830 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 AC007322.4-201ENST00000509611 723 ntBASIC13.17□□□□□ -0.3
COLCA2A8K830 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.17□□□□□ -0.3
COLCA2A8K830 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.17□□□□□ -0.3
COLCA2A8K830 HLA-A-209ENST00000638375 975 ntBASIC13.17□□□□□ -0.3
COLCA2A8K830 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
COLCA2A8K830 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
COLCA2A8K830 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.17□□□□□ -0.3
COLCA2A8K830 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.17□□□□□ -0.3
COLCA2A8K830 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
COLCA2A8K830 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
COLCA2A8K830 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.17□□□□□ -0.3
COLCA2A8K830 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 AC136621.1-201ENST00000624017 2304 ntBASIC13.17□□□□□ -0.3
COLCA2A8K830 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
COLCA2A8K830 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
COLCA2A8K830 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.17□□□□□ -0.3
COLCA2A8K830 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 AC034236.2-201ENST00000606662 1610 ntBASIC13.17□□□□□ -0.3
COLCA2A8K830 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COLCA2A8K830 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
COLCA2A8K830 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms