Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
LCHNA4D1U4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.33■□□□□ 0.53
LCHNA4D1U4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.33■□□□□ 0.53
LCHNA4D1U4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
LCHNA4D1U4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LCHNA4D1U4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.33■□□□□ 0.52
LCHNA4D1U4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCHNA4D1U4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LCHNA4D1U4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCHNA4D1U4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LCHNA4D1U4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.33■□□□□ 0.52
LCHNA4D1U4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LCHNA4D1U4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.33■□□□□ 0.52
LCHNA4D1U4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.33■□□□□ 0.52
LCHNA4D1U4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
LCHNA4D1U4 AC069120.2-201ENST00000524091 540 ntBASIC18.33■□□□□ 0.52
LCHNA4D1U4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.33■□□□□ 0.52
LCHNA4D1U4 AL161645.1-201ENST00000622716 1255 ntBASIC18.33■□□□□ 0.52
LCHNA4D1U4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.33■□□□□ 0.52
LCHNA4D1U4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
LCHNA4D1U4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCHNA4D1U4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LCHNA4D1U4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCHNA4D1U4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.33■□□□□ 0.52
LCHNA4D1U4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCHNA4D1U4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCHNA4D1U4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.32■□□□□ 0.52
LCHNA4D1U4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.32■□□□□ 0.52
LCHNA4D1U4 AC007613.1-201ENST00000572811 2597 ntBASIC18.32■□□□□ 0.52
LCHNA4D1U4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.32■□□□□ 0.52
LCHNA4D1U4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 SPDYE7P-202ENST00000420373 878 ntBASIC18.32■□□□□ 0.52
LCHNA4D1U4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.32■□□□□ 0.52
LCHNA4D1U4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.32■□□□□ 0.52
LCHNA4D1U4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.32■□□□□ 0.52
LCHNA4D1U4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LCHNA4D1U4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.32■□□□□ 0.52
LCHNA4D1U4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LCHNA4D1U4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LCHNA4D1U4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LCHNA4D1U4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.32■□□□□ 0.52
LCHNA4D1U4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.32■□□□□ 0.52
LCHNA4D1U4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCHNA4D1U4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.31■□□□□ 0.52
LCHNA4D1U4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LCHNA4D1U4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LCHNA4D1U4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LCHNA4D1U4 REXO1L11P-201ENST00000620964 1927 ntBASIC18.31■□□□□ 0.52
LCHNA4D1U4 ABALON-201ENST00000629058 1903 ntBASIC18.31■□□□□ 0.52
LCHNA4D1U4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 OR8S1-201ENST00000310194 1080 ntBASIC18.31■□□□□ 0.52
LCHNA4D1U4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LCHNA4D1U4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.31■□□□□ 0.52
LCHNA4D1U4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.31■□□□□ 0.52
LCHNA4D1U4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.31■□□□□ 0.52
LCHNA4D1U4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.31■□□□□ 0.52
LCHNA4D1U4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.31■□□□□ 0.52
LCHNA4D1U4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LCHNA4D1U4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 AL009183.1-201ENST00000603760 355 ntBASIC18.31■□□□□ 0.52
LCHNA4D1U4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.31■□□□□ 0.52
LCHNA4D1U4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.31■□□□□ 0.52
LCHNA4D1U4 AC084121.4-201ENST00000641598 221 ntBASIC18.31■□□□□ 0.52
LCHNA4D1U4 AF228730.8-201ENST00000642140 221 ntBASIC18.31■□□□□ 0.52
LCHNA4D1U4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.31■□□□□ 0.52
LCHNA4D1U4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.31■□□□□ 0.52
LCHNA4D1U4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCHNA4D1U4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms