Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PCDHA1-201ENST00000378133 2726 ntBASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF103-CHMP3A0A140T963 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 AL390719.2-201ENST00000606993 987 ntBASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RNF103-CHMP3A0A140T963 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 AL603756.1-201ENST00000606511 2163 ntBASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 AC060834.1-201ENST00000443027 2032 ntBASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 HYMAI.1-201ENST00000620949 238 ntBASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF103-CHMP3A0A140T963 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 Z83836.1-201ENST00000624605 1642 ntBASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 AC068472.1-201ENST00000474589 881 ntBASIC16.61■□□□□ 0.25
RNF103-CHMP3A0A140T963 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms