Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 KRT89P-201ENST00000620027 1478 ntBASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 MINOS1P3-201ENST00000457048 203 ntBASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 AL121912.1-201ENST00000603683 238 ntBASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 HLA-J-201ENST00000462773 1622 ntBASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX49Q9Y6V7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.7■□□□□ 0.91
DDX49Q9Y6V7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 AC011840.4-201ENST00000578471 627 ntBASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
DDX49Q9Y6V7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
DDX49Q9Y6V7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DDX49Q9Y6V7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.69■□□□□ 0.9
DDX49Q9Y6V7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX49Q9Y6V7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.69■□□□□ 0.9
DDX49Q9Y6V7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX49Q9Y6V7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX49Q9Y6V7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX49Q9Y6V7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX49Q9Y6V7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.69■□□□□ 0.9
DDX49Q9Y6V7 DUTP2-201ENST00000519164 463 ntBASIC20.69■□□□□ 0.9
DDX49Q9Y6V7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
DDX49Q9Y6V7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.69■□□□□ 0.9
DDX49Q9Y6V7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms