Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 AC090340.1-201ENST00000620778 4980 ntBASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 HCG11-201ENST00000411553 5696 ntBASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 AC096734.2-201ENST00000562054 433 ntBASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 PDPK2P-202ENST00000562415 1191 ntBASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 AP002472.1-201ENST00000577490 586 ntBASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 AC080080.1-201ENST00000625121 2420 ntBASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA9Q9Y5G4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 AL645939.2-201ENST00000427340 991 ntBASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 ACTG1P14-201ENST00000446382 1122 ntBASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 CEND1P1-201ENST00000451006 455 ntBASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 MIR3197-201ENST00000582241 73 ntBASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 AC019129.2-201ENST00000609837 1235 ntBASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 AC108860.2-201ENST00000562760 2183 ntBASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA9Q9Y5G4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA9Q9Y5G4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHGA9Q9Y5G4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PCDHGA9Q9Y5G4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA9Q9Y5G4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA9Q9Y5G4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA9Q9Y5G4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA9Q9Y5G4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGA9Q9Y5G4 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms