Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 SLC25A1P3-201ENST00000395415 828 ntBASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 RN7SL510P-201ENST00000581311 263 ntBASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 AL691432.3-201ENST00000621860 400 ntBASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB13Q9Y5F0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 AC004870.1-201ENST00000315132 882 ntBASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 LINC00982-205ENST00000420957 435 ntBASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 MTDHP4-201ENST00000600287 670 ntBASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 AL121912.1-201ENST00000603683 238 ntBASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB13Q9Y5F0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 NCF1C-201ENST00000438382 1427 ntBASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 FAAHP1-202ENST00000446499 1238 ntBASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 AL589182.2-201ENST00000619332 1049 ntBASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
PCDHB13Q9Y5F0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms