Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SATB2Q9UPW6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.9■□□□□ 0.3
SATB2Q9UPW6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SATB2Q9UPW6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SATB2Q9UPW6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SATB2Q9UPW6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SATB2Q9UPW6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.9■□□□□ 0.3
SATB2Q9UPW6 AC132938.6-201ENST00000623828 1655 ntBASIC16.9■□□□□ 0.3
SATB2Q9UPW6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SATB2Q9UPW6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SATB2Q9UPW6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SATB2Q9UPW6 AC008764.6-201ENST00000595909 2069 ntBASIC16.9■□□□□ 0.3
SATB2Q9UPW6 KRT18P28-201ENST00000453838 1332 ntBASIC16.9■□□□□ 0.3
SATB2Q9UPW6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SATB2Q9UPW6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.9■□□□□ 0.3
SATB2Q9UPW6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.9■□□□□ 0.3
SATB2Q9UPW6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.9■□□□□ 0.3
SATB2Q9UPW6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.9■□□□□ 0.3
SATB2Q9UPW6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SATB2Q9UPW6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SATB2Q9UPW6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SATB2Q9UPW6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SATB2Q9UPW6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SATB2Q9UPW6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 METTL21AP1-201ENST00000438852 635 ntBASIC16.89■□□□□ 0.29
SATB2Q9UPW6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 AC005829.1-201ENST00000570002 483 ntBASIC16.89■□□□□ 0.29
SATB2Q9UPW6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 AD001527.2-201ENST00000622994 785 ntBASIC16.89■□□□□ 0.29
SATB2Q9UPW6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.89■□□□□ 0.29
SATB2Q9UPW6 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 SPDYE21P-201ENST00000413323 827 ntBASIC16.88■□□□□ 0.29
SATB2Q9UPW6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 AC096633.1-201ENST00000422446 749 ntBASIC16.88■□□□□ 0.29
SATB2Q9UPW6 MCCD1P2-201ENST00000423228 335 ntBASIC16.88■□□□□ 0.29
SATB2Q9UPW6 PRYP5-201ENST00000451909 266 ntBASIC16.88■□□□□ 0.29
SATB2Q9UPW6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 AC122714.2-201ENST00000502787 707 ntBASIC16.88■□□□□ 0.29
SATB2Q9UPW6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 SNHG9-202ENST00000564014 471 ntBASIC16.88■□□□□ 0.29
SATB2Q9UPW6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
SATB2Q9UPW6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms