Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 AL512384.1-201ENST00000406683 331 ntBASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 AC092658.1-201ENST00000505836 891 ntBASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 AC027307.2-201ENST00000591252 911 ntBASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 AL138828.2-201ENST00000615812 383 ntBASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 CROCCP3-202ENST00000420820 1947 ntBASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.65■□□□□ 0.9
ZC3H4Q9UPT8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.64■□□□□ 0.9
ZC3H4Q9UPT8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZC3H4Q9UPT8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZC3H4Q9UPT8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.64■□□□□ 0.9
ZC3H4Q9UPT8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZC3H4Q9UPT8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
ZC3H4Q9UPT8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 AP006294.1-201ENST00000415407 339 ntBASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 INE1-201ENST00000456273 945 ntBASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3H4Q9UPT8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 AC009949.1-201ENST00000623048 1830 ntBASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 MIR3909-201ENST00000579518 119 ntBASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H4Q9UPT8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms