Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.66■□□□□ 0.74
SYNPO2Q9UMS6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPO2Q9UMS6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SYNPO2Q9UMS6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
SYNPO2Q9UMS6 CROCCP2-202ENST00000412962 2773 ntBASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 METTL21AP1-201ENST00000438852 635 ntBASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
SYNPO2Q9UMS6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 TFAMP1-201ENST00000412727 736 ntBASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 HLA-J-203ENST00000494367 1087 ntBASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 AL031055.1-201ENST00000606362 631 ntBASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPO2Q9UMS6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms