Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.18■□□□□ 0.5
TLR9Q9NR96 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TLR9Q9NR96 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TLR9Q9NR96 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TLR9Q9NR96 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR9Q9NR96 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TLR9Q9NR96 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR9Q9NR96 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.17■□□□□ 0.5
TLR9Q9NR96 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TLR9Q9NR96 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR9Q9NR96 MIR943-201ENST00000401286 94 ntBASIC18.17■□□□□ 0.5
TLR9Q9NR96 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TLR9Q9NR96 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TLR9Q9NR96 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.17■□□□□ 0.5
TLR9Q9NR96 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.17■□□□□ 0.5
TLR9Q9NR96 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR9Q9NR96 MIR4515-201ENST00000584082 81 ntBASIC18.17■□□□□ 0.5
TLR9Q9NR96 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.17■□□□□ 0.5
TLR9Q9NR96 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TLR9Q9NR96 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR9Q9NR96 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TLR9Q9NR96 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR9Q9NR96 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR9Q9NR96 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TLR9Q9NR96 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TLR9Q9NR96 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TLR9Q9NR96 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TLR9Q9NR96 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR9Q9NR96 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TLR9Q9NR96 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR9Q9NR96 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TLR9Q9NR96 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR9Q9NR96 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TLR9Q9NR96 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TLR9Q9NR96 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR9Q9NR96 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.16■□□□□ 0.5
TLR9Q9NR96 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.16■□□□□ 0.5
TLR9Q9NR96 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR9Q9NR96 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.16■□□□□ 0.5
TLR9Q9NR96 KLF2P3-201ENST00000451977 1087 ntBASIC18.16■□□□□ 0.5
TLR9Q9NR96 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.16■□□□□ 0.5
TLR9Q9NR96 DUX4L17-201ENST00000557360 1267 ntBASIC18.16■□□□□ 0.5
TLR9Q9NR96 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.16■□□□□ 0.5
TLR9Q9NR96 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.16■□□□□ 0.5
TLR9Q9NR96 AL161645.1-201ENST00000622716 1255 ntBASIC18.16■□□□□ 0.5
TLR9Q9NR96 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TLR9Q9NR96 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR9Q9NR96 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TLR9Q9NR96 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR9Q9NR96 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR9Q9NR96 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.16■□□□□ 0.5
TLR9Q9NR96 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TLR9Q9NR96 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TLR9Q9NR96 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TLR9Q9NR96 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR9Q9NR96 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 PCDHB18P-201ENST00000524813 2368 ntBASIC18.15■□□□□ 0.5
TLR9Q9NR96 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR9Q9NR96 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR9Q9NR96 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR9Q9NR96 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR9Q9NR96 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TLR9Q9NR96 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TLR9Q9NR96 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TLR9Q9NR96 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR9Q9NR96 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR9Q9NR96 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR9Q9NR96 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TLR9Q9NR96 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR9Q9NR96 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
TLR9Q9NR96 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.14■□□□□ 0.5
TLR9Q9NR96 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.14■□□□□ 0.5
TLR9Q9NR96 AC090164.3-201ENST00000610780 2143 ntBASIC18.14■□□□□ 0.5
TLR9Q9NR96 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TLR9Q9NR96 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.14■□□□□ 0.49
TLR9Q9NR96 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR9Q9NR96 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR9Q9NR96 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TLR9Q9NR96 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TLR9Q9NR96 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR9Q9NR96 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms