Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 AL118508.1-201ENST00000613502 2345 ntBASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 AC116353.5-201ENST00000638148 1699 ntBASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 RCN1P1-201ENST00000400413 996 ntBASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 AC096633.1-201ENST00000422446 749 ntBASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 MTCL1P1-201ENST00000446207 792 ntBASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 AC104076.2-201ENST00000448912 469 ntBASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 KRT18P38-201ENST00000449496 1282 ntBASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PFDN4Q9NQP4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.02■□□□□ 0.31
PFDN4Q9NQP4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
PFDN4Q9NQP4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
PFDN4Q9NQP4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN4Q9NQP4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN4Q9NQP4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN4Q9NQP4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.02■□□□□ 0.31
PFDN4Q9NQP4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN4Q9NQP4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN4Q9NQP4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN4Q9NQP4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 AC097374.2-201ENST00000618617 1306 ntBASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 IGHGP-201ENST00000390555 1178 ntBASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 AL353692.3-201ENST00000407031 1396 ntBASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN4Q9NQP4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN4Q9NQP4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN4Q9NQP4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN4Q9NQP4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17■□□□□ 0.31
PFDN4Q9NQP4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
PFDN4Q9NQP4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PFDN4Q9NQP4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PFDN4Q9NQP4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN4Q9NQP4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms