Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 IGHV3-22-201ENST00000520721 359 ntBASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP13A1Q9HD20 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 AL022342.1-201ENST00000400363 863 ntBASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 AL590787.1-201ENST00000568856 1315 ntBASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
ATP13A1Q9HD20 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 PTCHD3P3-201ENST00000403073 906 ntBASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 RPS15P9-201ENST00000494093 319 ntBASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 SLC25A1P1-201ENST00000528351 927 ntBASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 AL805961.1-202ENST00000641562 540 ntBASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 AP001094.4-201ENST00000579008 2176 ntBASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A1Q9HD20 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP13A1Q9HD20 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP13A1Q9HD20 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A1Q9HD20 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A1Q9HD20 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ATP13A1Q9HD20 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A1Q9HD20 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP13A1Q9HD20 RPL13AP23-201ENST00000480739 586 ntBASIC17.6■□□□□ 0.41
ATP13A1Q9HD20 RNA5SP415-201ENST00000517246 115 ntBASIC17.6■□□□□ 0.41
ATP13A1Q9HD20 UNC93B6-202ENST00000528242 690 ntBASIC17.6■□□□□ 0.41
ATP13A1Q9HD20 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.6■□□□□ 0.41
ATP13A1Q9HD20 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ATP13A1Q9HD20 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.6■□□□□ 0.41
ATP13A1Q9HD20 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP13A1Q9HD20 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms