Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 LINC00896-202ENST00000609602 2128 ntBASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 AP002414.1-201ENST00000391405 1147 ntBASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 YBX2P1-201ENST00000394192 760 ntBASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 RPSAP43-201ENST00000402237 625 ntBASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 DNAJB3-201ENST00000446806 729 ntBASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 AC108751.1-201ENST00000490852 363 ntBASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 AC008667.4-201ENST00000607370 168 ntBASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 AC055717.3-201ENST00000622967 595 ntBASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP6V0A4Q9HBG4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 GPX1P2-201ENST00000429271 606 ntBASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 IGHV3-65-201ENST00000523210 341 ntBASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP6V0A4Q9HBG4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP6V0A4Q9HBG4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP6V0A4Q9HBG4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms