Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.01■□□□□ 0.79
EFCC1Q9HA90 AC135050.7-201ENST00000624508 2218 ntBASIC20■□□□□ 0.79
EFCC1Q9HA90 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EFCC1Q9HA90 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
EFCC1Q9HA90 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20■□□□□ 0.79
EFCC1Q9HA90 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EFCC1Q9HA90 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EFCC1Q9HA90 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
EFCC1Q9HA90 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
EFCC1Q9HA90 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20■□□□□ 0.79
EFCC1Q9HA90 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20■□□□□ 0.79
EFCC1Q9HA90 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20■□□□□ 0.79
EFCC1Q9HA90 LINC00982-205ENST00000420957 435 ntBASIC20■□□□□ 0.79
EFCC1Q9HA90 CNN2P2-201ENST00000443536 909 ntBASIC20■□□□□ 0.79
EFCC1Q9HA90 CNN2P3-201ENST00000450201 906 ntBASIC20■□□□□ 0.79
EFCC1Q9HA90 TIMM8BP1-201ENST00000452384 211 ntBASIC20■□□□□ 0.79
EFCC1Q9HA90 CXCL1P1-201ENST00000502804 216 ntBASIC20■□□□□ 0.79
EFCC1Q9HA90 GATB-205ENST00000508611 605 ntTSL 2 BASIC20■□□□□ 0.79
EFCC1Q9HA90 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20■□□□□ 0.79
EFCC1Q9HA90 AL136317.3-201ENST00000618497 906 ntBASIC20■□□□□ 0.79
EFCC1Q9HA90 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20■□□□□ 0.79
EFCC1Q9HA90 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
EFCC1Q9HA90 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20■□□□□ 0.79
EFCC1Q9HA90 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20■□□□□ 0.79
EFCC1Q9HA90 AC093677.2-201ENST00000600169 1863 ntBASIC20■□□□□ 0.79
EFCC1Q9HA90 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20■□□□□ 0.79
EFCC1Q9HA90 EFTUD1P1-204ENST00000560401 1798 ntBASIC20■□□□□ 0.79
EFCC1Q9HA90 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20■□□□□ 0.79
EFCC1Q9HA90 AC009336.1-201ENST00000608941 1553 ntBASIC20■□□□□ 0.79
EFCC1Q9HA90 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 BX276092.7-203ENST00000637198 1536 ntBASIC19.99■□□□□ 0.79
EFCC1Q9HA90 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 AC112191.1-201ENST00000523689 701 ntBASIC19.99■□□□□ 0.79
EFCC1Q9HA90 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EFCC1Q9HA90 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 MIR661-201ENST00000384842 89 ntBASIC19.98■□□□□ 0.79
EFCC1Q9HA90 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 IGHV3-52-201ENST00000519770 353 ntBASIC19.98■□□□□ 0.79
EFCC1Q9HA90 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.98■□□□□ 0.79
EFCC1Q9HA90 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms