Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 AP002490.2-201ENST00000524791 560 ntBASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 AL023875.1-201ENST00000640777 796 ntBASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 AC138035.3-201ENST00000622706 2791 ntBASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 AP005117.1-202ENST00000581724 1908 ntBASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLIRPQ9GZT3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 PPT1-215ENST00000641471 2368 ntBASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 CICP13-201ENST00000422015 2789 ntBASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 MESTP1-201ENST00000404287 994 ntBASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 CDCA4P2-201ENST00000441182 718 ntBASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 AC002558.1-201ENST00000488906 803 ntBASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 CR769767.2-201ENST00000622735 460 ntBASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 CR392000.1-201ENST00000624770 1228 ntBASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLIRPQ9GZT3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 AC239809.2-201ENST00000415381 517 ntBASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 CROCCP5-201ENST00000436658 830 ntBASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 AC008403.3-201ENST00000598924 454 ntBASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 AC069544.1-201ENST00000609399 999 ntBASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 AC080038.1-201ENST00000611274 1154 ntBASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SLIRPQ9GZT3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLIRPQ9GZT3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms