Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 AC097374.2-201ENST00000618617 1306 ntBASIC16.8■□□□□ 0.28
EBF4Q9BQW3 AC103702.1-201ENST00000548801 2630 ntBASIC16.8■□□□□ 0.28
EBF4Q9BQW3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 AL645728.1-201ENST00000366221 2101 ntBASIC16.8■□□□□ 0.28
EBF4Q9BQW3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 FRMD8P1-201ENST00000440433 1524 ntBASIC16.8■□□□□ 0.28
EBF4Q9BQW3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EBF4Q9BQW3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 SPDYE15P-201ENST00000424157 909 ntBASIC16.79■□□□□ 0.28
EBF4Q9BQW3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.79■□□□□ 0.28
EBF4Q9BQW3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 IGHV3-52-201ENST00000519770 353 ntBASIC16.78■□□□□ 0.28
EBF4Q9BQW3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 AL138966.2-201ENST00000621997 464 ntBASIC16.78■□□□□ 0.28
EBF4Q9BQW3 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.78■□□□□ 0.28
EBF4Q9BQW3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms