Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SPENQ96T58 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.35■□□□□ 0.05
SPENQ96T58 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SPENQ96T58 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SPENQ96T58 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.35■□□□□ 0.05
SPENQ96T58 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SPENQ96T58 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.35■□□□□ 0.05
SPENQ96T58 AC002558.1-201ENST00000488906 803 ntBASIC15.35■□□□□ 0.05
SPENQ96T58 SPDYE18-201ENST00000510091 1050 ntBASIC15.35■□□□□ 0.05
SPENQ96T58 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.35■□□□□ 0.05
SPENQ96T58 CR383656.12-201ENST00000549567 513 ntBASIC15.35■□□□□ 0.05
SPENQ96T58 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SPENQ96T58 SLC22A20-204ENST00000530038 1673 ntBASIC15.35■□□□□ 0.05
SPENQ96T58 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SPENQ96T58 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SPENQ96T58 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SPENQ96T58 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.34■□□□□ 0.05
SPENQ96T58 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.34■□□□□ 0.05
SPENQ96T58 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.34■□□□□ 0.05
SPENQ96T58 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.34■□□□□ 0.05
SPENQ96T58 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.34■□□□□ 0.05
SPENQ96T58 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SPENQ96T58 TMEM14DP-201ENST00000422205 345 ntBASIC15.34■□□□□ 0.05
SPENQ96T58 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.34■□□□□ 0.05
SPENQ96T58 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.34■□□□□ 0.05
SPENQ96T58 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.34■□□□□ 0.05
SPENQ96T58 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.34■□□□□ 0.05
SPENQ96T58 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SPENQ96T58 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SPENQ96T58 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.34■□□□□ 0.05
SPENQ96T58 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 DDX43P3-201ENST00000441064 443 ntBASIC15.34■□□□□ 0.05
SPENQ96T58 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.34■□□□□ 0.05
SPENQ96T58 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.34■□□□□ 0.05
SPENQ96T58 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SPENQ96T58 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SPENQ96T58 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SPENQ96T58 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SPENQ96T58 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
SPENQ96T58 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SPENQ96T58 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.33■□□□□ 0.05
SPENQ96T58 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.33■□□□□ 0.05
SPENQ96T58 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.33■□□□□ 0.05
SPENQ96T58 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
SPENQ96T58 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SPENQ96T58 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.33■□□□□ 0.05
SPENQ96T58 AL662799.1-202ENST00000614205 422 ntBASIC15.33■□□□□ 0.05
SPENQ96T58 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.33■□□□□ 0.05
SPENQ96T58 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.33■□□□□ 0.05
SPENQ96T58 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
SPENQ96T58 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPENQ96T58 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.33■□□□□ 0.04
SPENQ96T58 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPENQ96T58 AC104794.3-201ENST00000566840 1248 ntBASIC15.33■□□□□ 0.04
SPENQ96T58 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.33■□□□□ 0.04
SPENQ96T58 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPENQ96T58 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPENQ96T58 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPENQ96T58 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.33■□□□□ 0.04
SPENQ96T58 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPENQ96T58 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SPENQ96T58 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.33■□□□□ 0.04
SPENQ96T58 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
SPENQ96T58 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPENQ96T58 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.33■□□□□ 0.04
SPENQ96T58 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPENQ96T58 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SPENQ96T58 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPENQ96T58 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPENQ96T58 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPENQ96T58 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPENQ96T58 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.33■□□□□ 0.04
SPENQ96T58 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.32■□□□□ 0.04
SPENQ96T58 UXT-AS1-201ENST00000590504 1525 ntBASIC15.32■□□□□ 0.04
SPENQ96T58 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 AC016027.1-202ENST00000607927 1699 ntBASIC15.32■□□□□ 0.04
SPENQ96T58 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SPENQ96T58 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.32■□□□□ 0.04
SPENQ96T58 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.32■□□□□ 0.04
SPENQ96T58 FAM86C2P-203ENST00000528684 1004 ntBASIC15.32■□□□□ 0.04
SPENQ96T58 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms