Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 HLA-L-209ENST00000420110 1011 ntBASIC16.24■□□□□ 0.19
NR1H4Q96RI1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 RNA5SP413-201ENST00000516373 109 ntBASIC16.24■□□□□ 0.19
NR1H4Q96RI1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.24■□□□□ 0.19
NR1H4Q96RI1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 AC073347.1-201ENST00000421633 2643 ntBASIC16.23■□□□□ 0.19
NR1H4Q96RI1 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 UNC93B5-201ENST00000530315 699 ntBASIC16.23■□□□□ 0.19
NR1H4Q96RI1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 AC124947.2-201ENST00000547118 1133 ntBASIC16.23■□□□□ 0.19
NR1H4Q96RI1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NR1H4Q96RI1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 NBPF21P-201ENST00000425093 1451 ntBASIC16.22■□□□□ 0.19
NR1H4Q96RI1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 SLC25A1P3-201ENST00000395415 828 ntBASIC16.22■□□□□ 0.19
NR1H4Q96RI1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.22■□□□□ 0.19
NR1H4Q96RI1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms