Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB3IPQ96QF0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.83■□□□□ 0.29
RAB3IPQ96QF0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RAB3IPQ96QF0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB3IPQ96QF0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB3IPQ96QF0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
RAB3IPQ96QF0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RAB3IPQ96QF0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 FAM207BP-201ENST00000447172 505 ntBASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 AL139327.4-201ENST00000612362 153 ntBASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB3IPQ96QF0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 BX276092.7-203ENST00000637198 1536 ntBASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 MIR3180-4-201ENST00000582223 153 ntBASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 AC083880.1-201ENST00000608266 535 ntBASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB3IPQ96QF0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 LINC00167-201ENST00000530583 1419 ntBASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB3IPQ96QF0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms