Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 AC021087.4-201ENST00000563761 564 ntBASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG4P5Q96PW8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 AC011676.5-201ENST00000624864 2660 ntBASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 EMBP1-201ENST00000458200 901 ntBASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 AL139424.1-201ENST00000607572 797 ntBASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG4P5Q96PW8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSPG4P5Q96PW8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CSPG4P5Q96PW8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CSPG4P5Q96PW8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.71■□□□□ 0.42
CSPG4P5Q96PW8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.71■□□□□ 0.42
CSPG4P5Q96PW8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.42
CSPG4P5Q96PW8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.71■□□□□ 0.42
CSPG4P5Q96PW8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 AC139887.3-201ENST00000568585 713 ntBASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
CSPG4P5Q96PW8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms