Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MS4A4EQ96PG1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 AC004817.3-201ENST00000602957 2129 ntBASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 TSPY19P-201ENST00000418461 509 ntBASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 TSPY18P-201ENST00000441642 509 ntBASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MS4A4EQ96PG1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 BX005266.1-201ENST00000473402 457 ntBASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 AC091304.2-201ENST00000564639 760 ntBASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 AL022326.1-202ENST00000641533 845 ntBASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MS4A4EQ96PG1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.04■□□□□ 0.16
MS4A4EQ96PG1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms