Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN4Q96NY8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NECTIN4Q96NY8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN4Q96NY8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN4Q96NY8 AP005018.1-201ENST00000525475 301 ntBASIC17.72■□□□□ 0.43
NECTIN4Q96NY8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.72■□□□□ 0.43
NECTIN4Q96NY8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN4Q96NY8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN4Q96NY8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NECTIN4Q96NY8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN4Q96NY8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN4Q96NY8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.72■□□□□ 0.43
NECTIN4Q96NY8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NECTIN4Q96NY8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.72■□□□□ 0.43
NECTIN4Q96NY8 AC135776.1-201ENST00000319817 2481 ntBASIC17.72■□□□□ 0.43
NECTIN4Q96NY8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN4Q96NY8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 PIN1P1-201ENST00000412108 996 ntBASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 AC241585.1-201ENST00000433527 519 ntBASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 ALG1L8P-201ENST00000533887 760 ntBASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 AC009118.2-201ENST00000613275 655 ntBASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 AC008267.7-201ENST00000624570 1194 ntBASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
NECTIN4Q96NY8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 OR8S1-201ENST00000310194 1080 ntBASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 AL359881.2-201ENST00000602973 570 ntBASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NECTIN4Q96NY8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms